RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 C4orf33Q8N1A6 199 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 OR52E1Q8NGJ3 308 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 STAG3L4Q8TBR4 150 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SSC4DQ8WTU2 575 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ATL1Q8WXF7 558 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 NCSTNQ92542 709 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 TMEM109Q9BVC6 243 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 EPB41L1Q9H4G0 881 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ALG9Q9H6U8 611 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 KIR3DX1Q9H7L2 352 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 PARVBQ9HBI1 364 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ARL15Q9NXU5 204 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 CD274Q9NZQ7 290 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SPATA7Q9P0W8 599 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF624Q9P2J8 865 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 LGALS13Q9UHV8 139 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 MID2Q9UJV3 735 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 PLAGL1Q9UM63 463 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 VPS4AQ9UN37 437 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 CDYLQ9Y232 598 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 NOTCH2Q04721 2471 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 NCF1BA6NI72 391 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 LILRA5A6NI73 299 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 NCF1CA8MVU1 366 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ARHGEF33A8MVX0 844 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 CDC7O00311 574 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 POLR1CO15160 346 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 SEMA7AO75326 666 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 PSIP1O75475 530 aaKnown RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 UBXN7O94888 489 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 KLHL2O95198 593 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 C1orf105O95561 183 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 PDGFAP04085 211 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 GSTA1P08263 222 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ANXA5P08758 320 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 RBP1P09455 135 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 COL6A2P12110 1019 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 GFAPP14136 432 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 NCF1P14598 390 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 CD1DP15813 335 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 KRT4P19013 534 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 TAC1P20366 129 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ACADLP28330 430 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 RAB28P51157 221 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 EPHA4P54764 986 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 AP1S2P56377 157 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 MAP7Q14244 749 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ERV3-1Q14264 604 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ACAP2Q15057 778 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 TSNQ15631 228 aaKnown RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF658BQ4V348 819 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 IRGCQ6NXR0 463 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 TIFABQ6ZNK6 161 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 LCA5Q86VQ0 697 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 AMIGO1Q86WK6 493 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 GPSM1Q86YR5 675 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ESX1Q8N693 406 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 GALNT11Q8NCW6 608 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 OR9A1PQ8NGU1 263 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ANKRD49Q8WVL7 239 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ZFPM2Q8WW38 1151 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 SREK1Q8WXA9 508 aaKnown RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 ISL2Q96A47 359 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 NXNL1Q96CM4 212 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 PDLIM5Q96HC4 596 aaKnown RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 VIPAS39Q9H9C1 493 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 WWOXQ9NZC7 414 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 NUDT4Q9NZJ9 180 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 CPSF2Q9P2I0 782 aaKnown RBP10.98□□□□□ -0.65
TMEM116-218ENST00000552839 POLHQ9Y253 713 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 CREBBPQ92793 2442 aa10.98□□□□□ -0.65
TMEM116-218ENST00000552839 A1L4Q6 167 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 HMX2A2RU54 273 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 OR6C74A6NCV1 312 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 TTLL8A6PVC2 850 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 ISM1B1AKI9 464 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 MATN2O00339 956 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 MAP3K7O43318 606 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 KERAO60938 352 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 RFPL1O75677 317 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 MATN4O95460 622 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF28P17035 718 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 TYRP1P17643 537 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 RPA3P35244 121 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-218ENST00000552839 DLSTP36957 453 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 HSD17B2P37059 387 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 MAGEA12P43365 314 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 ARL4DP49703 201 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 TIAL1Q01085 375 aaKnown RBP eCLIP10.97□□□□□ -0.65
TMEM116-218ENST00000552839 TMEM207Q6UWW9 146 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 IQCKQ8N0W5 287 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 TCAIMQ8N3R3 496 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 OR4E2Q8NGC2 313 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
TMEM116-218ENST00000552839 ASB11Q8WXH4 323 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms