RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 SEMA4GQ9NTN9 838 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 DDX18Q9NVP1 670 aaKnown RBP11.47□□□□□ -0.57
LETMD1-223ENST00000550442 DUS2Q9NX74 493 aaKnown RBP11.47□□□□□ -0.57
LETMD1-223ENST00000550442 DNAJB9Q9UBS3 223 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 CLEC4EQ9ULY5 219 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 AURKCQ9UQB9 309 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 MRPS23Q9Y3D9 190 aaKnown RBP11.47□□□□□ -0.57
LETMD1-223ENST00000550442 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
LETMD1-223ENST00000550442 FRYQ5TBA9 3013 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 KCNE1BA0A087WTH5 132 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 A0A1B0GTL3 188 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SLC5A10A0PJK1 596 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ASPDHA6ND91 283 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 TRIM64A6NGJ6 449 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 TRIM64CA6NLI5 447 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 FAM170BA6NMN3 283 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 MAP3K13O43283 966 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 LEFTY1O75610 366 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 FKBP9O95302 570 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 BMP10O95393 424 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ABCB1P08183 1280 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ELFN1P0C7U0 828 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 CD1EP15812 388 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ZNF23P17027 643 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ATP6V1B2P21281 511 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 IL12AP29459 219 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 MSX2P35548 267 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 CCR2P41597 374 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 STK19P49842 368 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 IRF8Q02556 426 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 MERTKQ12866 999 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 IL18R1Q13478 541 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ELAVL3Q14576 367 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 LPAL2Q16609 132 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 HIST2H2ACQ16777 129 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SLC5A9Q2M3M2 681 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 PTCHD3Q3KNS1 767 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ZC3H12BQ5HYM0 836 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 FAM46CQ5VWP2 391 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 HIST2H2AA3Q6FI13 130 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 GRHL2Q6ISB3 625 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 LIPIQ6XZB0 460 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 Q6ZVU0 165 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 PATL1Q86TB9 770 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 GPR180Q86V85 440 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 DHRSXQ8N5I4 330 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SNX31Q8N9S9 440 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 FAM156AQ8NDB6 213 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 OR56A3Q8NH54 315 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 NELL1Q92832 810 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 BHMTQ93088 406 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 BIRC7Q96CA5 298 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 MTERF3Q96E29 417 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 RMND5BQ96G75 393 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 REXO5Q96IC2 774 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 RNF145Q96MT1 663 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SMIM14Q96QK8 99 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 MYADMQ96S97 322 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 EFCAB11Q9BUY7 163 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 PCBD2Q9H0N5 130 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 ACTL8Q9H568 366 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 PAPOLBQ9NRJ5 636 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SMPD3Q9NY59 655 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 DEC1Q9P2X7 70 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 VPS29Q9UBQ0 182 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 SAMD4AQ9UPU9 718 aaKnown RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 RNF11Q9Y3C5 154 aa11.46□□□□□ -0.57
LETMD1-223ENST00000550442 POLR3HQ9Y535 204 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-223ENST00000550442 IGF2RP11717 2491 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 C1QTNF9BB2RNN3 333 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 C1QTNF3-AMACRE9PGA6 284 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 H3BNH8 94 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 CCNDBP1O95273 360 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 C1QTNF9P0C862 333 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 GRIA2P42262 883 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 KIR3DL1P43629 444 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 ARHGDIAP52565 204 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 CYP4F3Q08477 520 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 TMEM115Q12893 351 aaPredicted RBP11.45□□□□□ -0.58
LETMD1-223ENST00000550442 APOFQ13790 326 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 VEZF1Q14119 521 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 MLF2Q15773 248 aaPredicted RBP11.45□□□□□ -0.58
LETMD1-223ENST00000550442 CSRP2Q16527 193 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 HNRNPA1L2Q32P51 320 aaKnown RBP11.45□□□□□ -0.58
LETMD1-223ENST00000550442 SLC36A3Q495N2 470 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 TMEM52BQ4KMG9 183 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 CAPN13Q6MZZ7 669 aaPredicted RBP11.45□□□□□ -0.58
LETMD1-223ENST00000550442 GALNT18Q6P9A2 607 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 TSSK4Q6SA08 328 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 ABRAXAS1Q6UWZ7 409 aa11.45□□□□□ -0.58
LETMD1-223ENST00000550442 UNC5DQ6UXZ4 953 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms