RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OPN1SWP03999 348 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CDKN2CP42773 168 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 C10orf62Q5T681 223 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 SNX20Q7Z614 316 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CHPFQ8IZ52 775 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 SLC43A3Q8NBI5 491 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 GTPBP3Q969Y2 492 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 CDKN2AIPNLQ96HQ2 116 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 HDHD5Q9BXW7 423 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 TRIM45Q9H8W5 580 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 AP2A2O94973 939 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 RETP07949 1114 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CYP2A6P11509 494 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 FAPQ12884 760 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 PARP15Q460N3 678 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CDONQ4KMG0 1287 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 FAM205BPQ63HN1 556 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 SKA2Q8WVK7 121 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 SPON2Q9BUD6 331 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 C11orf54Q9H0W9 315 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 LRTM1Q9HBL6 345 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 HEBP1Q9NRV9 189 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CCDC59Q9P031 241 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 ACTL7AQ9Y615 435 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 FABP12A6NFH5 140 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 SCAMP3O14828 347 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 POLR1CO15160 346 aaPredicted RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 CDK1P06493 297 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 GNPDA1P46926 289 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ZXDBP98169 803 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 EFR3AQ14156 821 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 IHHQ14623 411 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 DUSP7Q16829 419 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 EIF3MQ7L2H7 374 aaKnown RBP11.78□□□□□ -0.52
VDR-208ENST00000550325 GLT6D1Q7Z4J2 308 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CCDC190Q86UF4 302 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ASB15Q8WXK1 588 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 EGLN2Q96KS0 407 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 FEVQ99581 238 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CCM2Q9BSQ5 444 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ATP13A2Q9NQ11 1180 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ACOXLQ9NUZ1 547 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 ZNF224Q9NZL3 707 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 WWP2O00308 870 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 GLUD1P00367 558 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 RPS3P23396 243 aaKnown RBP eCLIP11.77□□□□□ -0.52
VDR-208ENST00000550325 USP39Q53GS9 565 aaKnown RBP11.77□□□□□ -0.52
VDR-208ENST00000550325 SDHAF4Q5VUM1 108 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 SLC34A3Q8N130 599 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 MYLPFQ96A32 169 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 PDLIM5Q96HC4 596 aaKnown RBP11.77□□□□□ -0.52
VDR-208ENST00000550325 COL21A1Q96P44 957 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 IL4I1Q96RQ9 567 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 GPRC5BQ9NZH0 403 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 PSORS1C1Q9UIG5 152 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 POLHQ9Y253 713 aa11.77□□□□□ -0.52
VDR-208ENST00000550325 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
VDR-208ENST00000550325 EPN2O95208 641 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 IL6P05231 212 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 RPS19P39019 145 aaKnown RBP11.77□□□□□ -0.53
VDR-208ENST00000550325 SLC14A1Q13336 389 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 PTPRRQ15256 657 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 TBCEQ15813 527 aaPredicted RBP11.77□□□□□ -0.53
VDR-208ENST00000550325 FXNQ16595 210 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 OR4F3Q6IEY1 312 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 PANX1Q96RD7 426 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 A8MX80 341 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 B8ZZF3 427 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 NT5C1B-RDH14C9J2C7 533 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 OR7A10O76100 309 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 CD72P21854 359 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 TIMM50Q3ZCQ8 353 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 SUSD1Q6UWL2 747 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 LSMEM1Q8N8F7 131 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
VDR-208ENST00000550325 RIPOR3Q96MK2 946 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 ZNF382Q96SR6 550 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 FAM83DQ9H4H8 585 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 MAGIXQ9H6Y5 334 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 DERAQ9Y315 318 aa11.77□□□□□ -0.53
VDR-208ENST00000550325 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
VDR-208ENST00000550325 HAS3O00219 553 aa11.76□□□□□ -0.53
VDR-208ENST00000550325 PSIP1O75475 530 aaKnown RBP11.76□□□□□ -0.53
VDR-208ENST00000550325 OTCP00480 354 aa11.76□□□□□ -0.53
VDR-208ENST00000550325 PKMP14618 531 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms