RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FBLP22087 321 aaKnown RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FDXRP22570 491 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 GNLYP22749 145 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 CXCR2P25025 360 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 PSMB5P28074 263 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 OR1D4P47884 311 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 RGS4P49798 205 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 ARF3P61204 181 aaPredicted RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 TAP2Q03519 686 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 CTBP1Q13363 440 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 TSTA3Q13630 321 aaPredicted RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 DSG2Q14126 1118 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FAM53BQ14153 422 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FASTKQ14296 549 aaKnown RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 PRTGQ2VWP7 1150 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FRMPD2BQ6IN97 320 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 KIRREL2Q6UWL6 708 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 IGFL2Q6UWQ7 119 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 COX15Q7KZN9 410 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 DENND6AQ8IWF6 608 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 OR4N4Q8N0Y3 316 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 CSNK1A1LQ8N752 337 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 STT3BQ8TCJ2 826 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 PPP4R1Q8TF05 950 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZNF480Q8WV37 535 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FAM136AQ96C01 138 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SIGLEC10Q96LC7 697 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 CCDC138Q96M89 665 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 LMF1Q96S06 567 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 ACAT2Q9BWD1 397 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 LHPPQ9H008 270 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SOX17Q9H6I2 414 aaPredicted RBP10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 EPS8L2Q9H6S3 715 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC6A20Q9NP91 592 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 AGPAT4Q9NRZ5 378 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 C14orf105Q9NVL8 296 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 TAC3Q9UHF0 121 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 FBXO5Q9UKT4 447 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 HS3ST3B1Q9Y662 390 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 DOPEY2Q9Y3R5 2298 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 KCNE1BA0A087WTH5 132 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TCP11X1B4DZS4 312 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 MAP2K7O14733 419 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC16A5O15375 505 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 DDAH2O95865 285 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC16A8O95907 504 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SYF2O95926 243 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HPP00738 406 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 C8GP07360 202 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 CYC1P08574 325 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 ICAM2P13598 275 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 ACPPP15309 386 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TCP1P17987 556 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 CCND1P24385 295 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC1A2P43004 574 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 KLC1Q07866 573 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SP140Q13342 867 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 ELOAQ14241 798 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TLR1Q15399 786 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HSP90AA5PQ58FG0 334 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 THEMIS2Q5TEJ8 643 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 B3GNTL1Q67FW5 361 aaPredicted RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZNF425Q6IV72 752 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 CYHR1Q6ZMK1 362 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 KIAA0408Q6ZU52 694 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SYDE1Q6ZW31 735 aaPredicted RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 NDUFAF7Q7L592 441 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 KCNMB4Q86W47 210 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 PAQR7Q86WK9 346 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 OR11G2Q8NGC1 345 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLCO2A1Q92959 643 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SNRNP40Q96DI7 357 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 RUNDC3BQ96NL0 473 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 OR2A5Q96R48 311 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 H2AFJQ9BTM1 129 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TGIF2Q9GZN2 237 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 MKKSQ9NPJ1 570 aaPredicted RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 FBXO6Q9NRD1 293 aaPredicted RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TMEM184CQ9NVA4 438 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TAS2R13Q9NYV9 303 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 GALPQ9UBC7 116 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 CTSFQ9UBX1 484 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 TRMT6Q9UJA5 497 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 C3orf18Q9UK00 162 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 COPG1Q9Y678 874 aaKnown RBP10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 MAU2Q9Y6X3 613 aa10.37□□□□□ -0.75
VTI1BP3-201ENST00000550220 FLNCQ14315 2725 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 PABPN1LA6NDY0 278 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 HAUS5O94927 633 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 MYBL2P10244 700 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms