RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ABI3Q9P2A4 366 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 SEC14L3Q9UDX4 400 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 HS3ST3B1Q9Y662 390 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 CPAMD8Q8IZJ3 1885 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ABCA4P78363 2273 aa11.65□□□□□ -0.55
DDX54-206ENST00000549271 TMEM200CA6NKL6 621 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 AP3B1O00203 1094 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 FANCGO15287 622 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 CD3EAPO15446 510 aaKnown RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 GPC4O75487 556 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 PKLRP30613 574 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 CCR7P32248 378 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 TNFSF10P50591 281 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 ARSFP54793 590 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 CSNK1G2P78368 415 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 SYTL3Q4VX76 610 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 YOD1Q5VVQ6 348 aaPredicted RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 KIRREL2Q6UWL6 708 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 MPP5Q8N3R9 675 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 LKAAEAR1Q8TD35 194 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 DLG3Q92796 817 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 SLC22A18Q96BI1 424 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 THOC3Q96J01 351 aaKnown RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 ZNF285Q96NJ3 590 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 TTC1Q99614 292 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 CARD6Q9BX69 1037 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 GSX1Q9H4S2 264 aaPredicted RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 WDR54Q9H977 334 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 SEMA3GQ9NS98 782 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 CATSPERZQ9NTU4 200 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 SNX12Q9UMY4 172 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 SOX13Q9UN79 622 aa11.64□□□□□ -0.55
DDX54-206ENST00000549271 TDRKHQ9Y2W6 561 aaKnown RBP11.64□□□□□ -0.55
DDX54-206ENST00000549271 IQCF5A8MTL0 148 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 ISM1B1AKI9 464 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 CES2O00748 559 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 KIF5CO60282 957 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 SLC19A2O60779 497 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 FKBP9O95302 570 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 S1PR4O95977 384 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 RPN2P04844 631 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 PIM1P11309 404 aaPredicted RBP11.63□□□□□ -0.55
DDX54-206ENST00000549271 KLK2P20151 261 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 CD9P21926 228 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 GRB7Q14451 532 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 C3AR1Q16581 482 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 UNC5DQ6UXZ4 953 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
DDX54-206ENST00000549271 OVCH1Q7RTY7 1134 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 VRK3Q8IV63 474 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 MCATQ8IVS2 390 aaKnown RBP11.63□□□□□ -0.55
DDX54-206ENST00000549271 LINC01555Q8NAE3 123 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 MCUQ8NE86 351 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 DNAJB8Q8NHS0 232 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 ASZ1Q8WWH4 475 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 NAP1L3Q99457 506 aaPredicted RBP11.63□□□□□ -0.55
DDX54-206ENST00000549271 P2RY12Q9H244 342 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 DLL4Q9NR61 685 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 TNFRSF10DQ9UBN6 386 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 CDC23Q9UJX2 597 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 HCFC1P51610 2035 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 GTF3C1Q12789 2109 aa11.63□□□□□ -0.55
DDX54-206ENST00000549271 TRAV17A0A0B4J275 112 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 A0A1B0GX78 115 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 FITM1A5D6W6 292 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 TARM1B6A8C7 271 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 PRMT5O14744 637 aaPredicted RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 PHF2O75151 1096 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 SLCO2B1O94956 709 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 VAPBO95292 243 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 CRYABP02511 175 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 ITGAXP20702 1163 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 MAGP20916 626 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 AOAHP28039 575 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 DNAJA1P31689 397 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 PPARGP37231 505 aaPredicted RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 TTPAP49638 278 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 CSE1LP55060 971 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 CASP6P55212 293 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 ARG2P78540 354 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 SRSF11Q05519 484 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 RBPJQ06330 500 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 LONRF1Q17RB8 773 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 TUBB8Q3ZCM7 444 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 ZC3H12BQ5HYM0 836 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 AARS2Q5JTZ9 985 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 TCTE1Q5JU00 501 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 FAAH2Q6GMR7 532 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 DCUN1D3Q8IWE4 304 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 KRT222Q8N1A0 295 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 AGGF1Q8N302 714 aaeCLIP11.62□□□□□ -0.55
DDX54-206ENST00000549271 OR11G2Q8NGC1 345 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms