RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SLC26A1Q9H2B4 701 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 ZNF304Q9HCX3 659 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 SLC22A11Q9NSA0 550 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
TROAP-208ENST00000548817 KCNN3Q9UGI6 736 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 SH3BGRL2Q9UJC5 107 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 CDC14AQ9UNH5 594 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 TFR2Q9UP52 801 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 HS3ST3B1Q9Y662 390 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 EPN1Q9Y6I3 576 aaPredicted RBP8.09□□□□□ -1.11
TROAP-208ENST00000548817 AKAP6Q13023 2319 aa8.09□□□□□ -1.11
TROAP-208ENST00000548817 HYKKA2RU49 373 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 MIF4GDA9UHW6 222 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 SOCS6O14544 535 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 RASGRF2O14827 1237 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PFDN6O15212 129 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
TROAP-208ENST00000548817 WFS1O76024 890 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 ONECUT2O95948 504 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 HPP00738 406 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 EIF2S1P05198 315 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 TPBGLP0DKB5 382 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 MCM3P25205 808 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PEBP1P30086 187 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 STIP1P31948 543 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 CCR7P32248 378 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 FOXN2P32314 431 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 FDFT1P37268 417 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 CCNFP41002 786 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TTPAP49638 278 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TNFSF10P50591 281 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TERF1P54274 439 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 AP2B1P63010 937 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 DSG2Q14126 1118 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 C3AR1Q16581 482 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 MUM1Q2TAK8 710 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TSTD2Q5T7W7 516 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 CES4AQ5XG92 561 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 AADACL2Q6P093 401 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PRMT9Q6P2P2 845 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 Q6ZPB1 254 aaPredicted RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 KIAA1328Q86T90 577 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TMEM200AQ86VY9 491 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 KLHDC8BQ8IXV7 354 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PRSS58Q8IYP2 241 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 EID3Q8N140 333 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TC2NQ8N9U0 490 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 LINC01555Q8NAE3 123 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PPHLN1Q8NEY8 458 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 OR11G2Q8NGC1 345 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 SUN3Q8TAQ9 357 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 MAGEC3Q8TD91 643 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 NUDT8Q8WV74 236 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 MAGED4Q96JG8 741 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 C18orf12Q96KH6 178 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 IL17FQ96PD4 163 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 PANX3Q96QZ0 392 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 SPSB2Q99619 263 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 ZNF559Q9BR84 538 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TMEM121Q9BTD3 319 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.08□□□□□ -1.12
TROAP-208ENST00000548817 ZNF160Q9HCG1 818 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 CCM2LQ9NUG4 571 aaPredicted RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 UTP6Q9NYH9 597 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 CTSFQ9UBX1 484 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 ZC3H7BQ9UGR2 993 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 CIDEBQ9UHD4 219 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 GNPTGQ9UJJ9 305 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 C3orf18Q9UK00 162 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 RIMKLBQ9ULI2 386 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 TTC7AQ9ULT0 858 aaPredicted RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 MEMO1Q9Y316 297 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 MRPS2Q9Y399 296 aaKnown RBP8.08□□□□□ -1.12
TROAP-208ENST00000548817 MAU2Q9Y6X3 613 aa8.08□□□□□ -1.12
TROAP-208ENST00000548817 NSG1A0A0A6YYJ2 146 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 A0A0J9YVX5 310 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 BTNL10A8MVZ5 291 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 GOLGA6L6A8MZA4 724 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 PRMT5O14744 637 aaPredicted RBP8.07□□□□□ -1.12
TROAP-208ENST00000548817 VPS26AO75436 327 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 GPC4O75487 556 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 NDUFS3O75489 264 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 MLYCDO95822 493 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 IFNB1P01574 187 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 HEXAP06865 529 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 ANXA5P08758 320 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 ZGLP1P0C6A0 271 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 FBLP22087 321 aaKnown RBP8.07□□□□□ -1.12
TROAP-208ENST00000548817 FDXRP22570 491 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 PSMA3P25788 255 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 AOAHP28039 575 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 CMPK1P30085 196 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 MEOX1P50221 254 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 EMP2P54851 167 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 YBX1P67809 324 aaKnown RBP8.07□□□□□ -1.12
TROAP-208ENST00000548817 KLC1Q07866 573 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 CNSTQ6PJW8 725 aa8.07□□□□□ -1.12
TROAP-208ENST00000548817 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms