RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ETV5P41161 510 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 EIF5P55010 431 aaKnown RBP3.25□□□□□ -1.89
CCDC38-204ENST00000546816 KLC1Q07866 573 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 TMEM132DQ14C87 1099 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 PTPN14Q15678 1187 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 SNAPC1Q16533 368 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 PHKG1Q16816 387 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 C15orf32Q32M92 178 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 GPR33Q49SQ1 333 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 HIGD2BQ4VC39 106 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 SEL1L3Q68CR1 1132 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 PRR27Q6MZM9 219 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 MARCH9Q86YJ5 346 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 OR7A2PQ8NGA2 310 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 OR4K1Q8NGD4 311 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 OR10Q1Q8NGQ4 319 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 TMCO6Q96DC7 493 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 C2orf48Q96LS8 159 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 BARD1Q99728 777 aaKnown RBP3.25□□□□□ -1.89
CCDC38-204ENST00000546816 PARLQ9H300 379 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 Q9H8V8 135 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 CHST11Q9NPF2 352 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 BLOC1S4Q9NUP1 217 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 ADD3Q9UEY8 706 aaKnown RBP3.25□□□□□ -1.89
CCDC38-204ENST00000546816 TBC1D29Q9UFV1 150 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 ABCA7Q8IZY2 2146 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 A0A1W2PPM1 405 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 hCG_1807616A0A1W2PRN6 198 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 NPIPB9F8W1W9 429 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 G3V2L1 256 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
CCDC38-204ENST00000546816 SNAP91O60641 907 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 KRT33AO76009 404 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 PFKFB1P16118 471 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 SAT1P21673 171 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 CD27P26842 260 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 OR3A2P47893 321 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 DNA2P51530 1060 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 ALDH3A2P51648 485 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 HSPB3Q12988 150 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 CHAF1BQ13112 559 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 VEZF1Q14119 521 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 NTRK2Q16620 822 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 HYIQ5T013 277 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 C9orf43Q8TAL5 461 aaPredicted RBP3.24□□□□□ -1.89
CCDC38-204ENST00000546816 PRPF31Q8WWY3 499 aaKnown RBP3.24□□□□□ -1.89
CCDC38-204ENST00000546816 FAM71F1Q96KD3 344 aaPredicted RBP3.24□□□□□ -1.89
CCDC38-204ENST00000546816 LGMNQ99538 433 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 SEPHS2Q99611 448 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 MAP3K3Q99759 626 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 MRPL1Q9BYD6 325 aaKnown RBP3.24□□□□□ -1.89
CCDC38-204ENST00000546816 NYXQ9GZU5 481 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 TBC1D22BQ9NU19 505 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 VPS28Q9UK41 221 aa3.24□□□□□ -1.89
CCDC38-204ENST00000546816 PHOX2AO14813 284 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 RAB40ALP0C0E4 278 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 LINGO3P0C6S8 592 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 PRKAR1AP10644 381 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 IRF2P14316 349 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 PORP16435 677 aaPredicted RBP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 MTHFRP42898 656 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 MATR3P43243 847 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 ZFP36L2P47974 494 aaKnown RBP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 VAMP7P51809 220 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 GEMIN4P57678 1058 aaKnown RBP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 MYL7Q01449 175 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 TRA2AQ13595 282 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 WTAPQ15007 396 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 FAM189A2Q15884 450 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 ADGRA1Q86SQ6 560 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 FAM131BQ86XD5 332 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 KLHDC1Q8N7A1 406 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 PTERQ96BW5 349 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 EVI5LQ96CN4 794 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 C1orf147Q96MC9 270 aaPredicted RBP3.23□□□□□ -1.89
CCDC38-204ENST00000546816 ZMYND12Q9H0C1 365 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 HEXA-AS1Q9H8Q6 139 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 PDE7BQ9NP56 450 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 STK26Q9P289 416 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 PRO0461Q9UI25 63 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 RNF150Q9ULK6 438 aa3.23□□□□□ -1.89
CCDC38-204ENST00000546816 IGHV4-30-2A0A087WSY4 118 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 A0A1W2PPK0 400 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ANKRD18BA2A2Z9 1011 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 IPO8O15397 1037 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 POP4O95707 220 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ATP1B1P05026 303 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ALOX12P18054 663 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ELAVL4P26378 380 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 CAPGP40121 348 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 CLCN4P51793 760 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 MAPRE1Q15691 268 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 MEA1Q16626 185 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 TAGAPQ8N103 731 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 NDUFAF2Q8N183 169 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 TDRD5Q8NAT2 981 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms