RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 GPN3Q9UHW5 284 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 KLHL20Q9Y2M5 609 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 TMEM184BQ9Y519 407 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 A0A0J9YVX5 310 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 A0A1W2PPV9 198 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 TLDC2A0PJX2 215 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 SMIM23A6NLE4 172 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 C9J4A7 227 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 ZSCAN9O15535 394 aaPredicted RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 TLX3O43711 291 aaPredicted RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 STK16O75716 305 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 WDR47O94967 919 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 NTRK1P04629 796 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 MYBL2P10244 700 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 TAC1P20366 129 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 RPS15AP62244 130 aaKnown RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 RPS15P62841 145 aaKnown RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 RELAQ04206 551 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 ABHD18Q0P651 414 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 NDUFA9Q16795 377 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 PPP1R3AQ16821 1122 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 DEFB110Q30KQ9 67 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 CCDC81Q6ZN84 652 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 MBOAT1Q6ZNC8 495 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 THOC6Q86W42 341 aaKnown RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 DNAJC22Q8N4W6 341 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 OR56A3Q8NH54 315 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 FLVCR1-AS1Q8TAF5 88 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 ACMSDQ8TDX5 336 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 CAVIN3Q969G5 261 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 PYCR2Q96C36 320 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 THAP11Q96EK4 314 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 DPH2Q9BQC3 489 aaPredicted RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 GPN2Q9H9Y4 310 aaPredicted RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 NDOR1Q9UHB4 597 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 KCND3Q9UK17 655 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 KLK4Q9Y5K2 254 aa16.79■□□□□ 0.28
CD9-211ENST00000546073 TNPO3Q9Y5L0 923 aaKnown RBP16.79■□□□□ 0.28
CD9-211ENST00000546073 H7BY64 318 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 CDH16O75309 829 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 ALDOAP04075 364 aaKnown RBP16.78■□□□□ 0.28
CD9-211ENST00000546073 GNAZP19086 355 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 ALAS2P22557 587 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 HSD17B3P37058 310 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 GLRBP48167 497 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 TMPRSS3P57727 454 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 VSX2P58304 361 aaPredicted RBP16.78■□□□□ 0.28
CD9-211ENST00000546073 MC1RQ01726 317 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 HIST2H2ACQ16777 129 aaPredicted RBP16.78■□□□□ 0.28
CD9-211ENST00000546073 PTCHD3Q3KNS1 767 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 HIST2H2AA3Q6FI13 130 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 TIFABQ6ZNK6 161 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 KRT78Q8N1N4 520 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 RIBC1Q8N443 379 aaPredicted RBP16.78■□□□□ 0.28
CD9-211ENST00000546073 SNX31Q8N9S9 440 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 GALNT6Q8NCL4 622 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 OR1L3Q8NH93 324 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 SLC5A11Q8WWX8 675 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 MR1Q95460 341 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 PRAP1Q96NZ9 151 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 AIF1LQ9BQI0 150 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 TWSG1Q9GZX9 223 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 IQCGQ9H095 443 aaKnown RBP16.78■□□□□ 0.28
CD9-211ENST00000546073 FAM60AQ9NP50 221 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
CD9-211ENST00000546073 A0A087WV48 116 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 SRRM3A6NNA2 597 aaPredicted RBP16.77■□□□□ 0.28
CD9-211ENST00000546073 ZNF749O43361 778 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 CCNT2O60583 730 aaKnown RBP16.77■□□□□ 0.28
CD9-211ENST00000546073 ZIC1Q15915 447 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 ISCA2Q86U28 154 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 SPACA3Q8IXA5 215 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 PROKR1Q8TCW9 393 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 NKD1Q969G9 470 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 ROPN1BQ9BZX4 212 aaPredicted RBP16.77■□□□□ 0.28
CD9-211ENST00000546073 FAM117AQ9C073 453 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 ROPN1Q9HAT0 212 aaPredicted RBP16.77■□□□□ 0.28
CD9-211ENST00000546073 DNAJC11Q9NVH1 559 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 GPRC5BQ9NZH0 403 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 OPTCQ9UBM4 332 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 DCDC2Q9UHG0 476 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 CDC14AQ9UNH5 594 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 SLC22A14Q9Y267 594 aa16.77■□□□□ 0.28
CD9-211ENST00000546073 OR2A25A4D2G3 310 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 PRPF4O43172 522 aaKnown RBP eCLIP16.76■□□□□ 0.27
CD9-211ENST00000546073 WISP3O95389 354 aaPredicted RBP16.76■□□□□ 0.27
CD9-211ENST00000546073 CDH1P12830 882 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 NPPBP16860 134 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 TCN2P20062 427 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 HPDP32754 393 aaPredicted RBP16.76■□□□□ 0.27
CD9-211ENST00000546073 SLCO1A2P46721 670 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 CCT5P48643 541 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 SKP1P63208 163 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 CDC16Q13042 620 aa16.76■□□□□ 0.27
CD9-211ENST00000546073 CLN3Q13286 438 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms