RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 RGS9O75916 674 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 LDLRP01130 860 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 SLC4A1P02730 911 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CAPN1P07384 714 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 HTR1AP08908 422 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 ACADMP11310 421 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 IL7P13232 177 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PRKACAP17612 351 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TYK2P29597 1187 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 HTR2BP41595 481 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CCR2P41597 374 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CSRP3P50461 194 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 UGT2B15P54855 530 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CXCR4P61073 352 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 OGDHQ02218 1023 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CYP24A1Q07973 514 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CYP4F3Q08477 520 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TNK1Q13470 666 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 DAG1Q14118 895 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 ACAP2Q15057 778 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TARBP2Q15633 366 aaKnown RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 GEN1Q17RS7 908 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TXNRD3NBQ6F5E7 133 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CXorf57Q6NSI4 855 aaKnown RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TRMT10BQ6PF06 316 aaKnown RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 NAPRTQ6XQN6 538 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 GDPD3Q7L5L3 318 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 RFX6Q8HWS3 928 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 OFCC1Q8IZS5 231 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TCTE3Q8IZS6 198 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CLEC4FQ8N1N0 589 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TCAIMQ8N3R3 496 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 NXNL1Q96CM4 212 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 TMCO6Q96DC7 493 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 RSPRY1Q96DX4 576 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 C1orf159Q96HA4 380 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 MUS81Q96NY9 551 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 MCEEQ96PE7 176 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 NODALQ96S42 347 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 ZNF700Q9H0M5 742 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PCIF1Q9H4Z3 704 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 NARFLQ9H6Q4 476 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PRDM8Q9NQV8 689 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 FBXL12Q9NXK8 326 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 USE1Q9NZ43 259 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 CCDC59Q9P031 241 aaKnown RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 AP3M1Q9Y2T2 418 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PCDHGB2Q9Y5G2 931 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PCDHGA9Q9Y5G4 932 aaKnown RBP4.49□□□□□ -1.69
CNGA1-209ENST00000544810 PCDHGA6Q9Y5G7 932 aa4.49□□□□□ -1.69
CNGA1-209ENST00000544810 IGKV6-21A0A0C4DH24 114 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 A0A0G2JMP0 313 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 OR5K4A6NMS3 321 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 SDHDO14521 159 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 MRASO14807 208 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ARHGEF9O43307 516 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 NOS1APO75052 506 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ZNF780AO75290 641 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 MOSPD3O75425 235 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 LYPLA2O95372 231 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 MED26O95402 600 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 PIGNO95427 931 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 SNAP29O95721 258 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ITGB3P05106 788 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 THRBP10828 461 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ENGP17813 658 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 PGAM1P18669 254 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 HOXA11P31270 313 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 RYKP34925 604 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 SPRP35270 261 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ABCG1P45844 678 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 LIMK2P53671 638 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ARSFP54793 590 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 TSPY1Q01534 308 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CUL2Q13617 745 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 MAPK11Q15759 364 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 PARP15Q460N3 678 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 ZNF404Q494X3 552 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CATSPEREQ5SY80 951 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 FAM171A1Q5VUB5 890 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 SHEQ5VZ18 495 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CYP20A1Q6UW02 462 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 BEND5Q7L4P6 421 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 STRADAQ7RTN6 431 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 LIMS2Q7Z4I7 341 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 YAF2Q8IY57 180 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 TMEFF1Q8IYR6 380 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CADM2Q8N3J6 435 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CARNMT1Q8N4J0 409 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 PCDH20Q8N6Y1 951 aaKnown RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 TMEM35BQ8NCS4 154 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 CHDHQ8NE62 594 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 C1orf162Q8NEQ5 155 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-209ENST00000544810 MCFD2Q8NI22 146 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 TSPEARQ8WU66 669 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 FAR1Q8WVX9 515 aa4.48□□□□□ -1.69
CNGA1-209ENST00000544810 RORBQ92753 470 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms