RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SDC2P34741 201 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 MERTKQ12866 999 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 SEMA3AQ14563 771 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 PRR23BQ6ZRT6 265 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 KIAA1191Q96A73 305 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 CMTM7Q96FZ5 175 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 KCNN2Q9H2S1 579 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 TAS2R50P59544 299 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 RBBP4Q09028 425 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 PLEKHG6Q3KR16 790 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 SPIN4Q56A73 249 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 ZNF648Q5T619 568 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 EPGNQ6UW88 154 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 LGI4Q8N135 537 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 OXR1Q8N573 874 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 ZNF296Q8WUU4 475 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 EFHD2Q96C19 240 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
CHD4-211ENST00000544484 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 TEX28O15482 410 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 TYRP1P17643 537 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 C7orf43Q8WVR3 580 aa12.47□□□□□ -0.41
CHD4-211ENST00000544484 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 AQP12BA6NM10 295 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 H3BNX3 289 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 GPR32O75388 356 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 LEFTY1O75610 366 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 TNFP01375 233 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 CDH1P12830 882 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 MLLT3P42568 568 aaPredicted RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 SLC10A2Q12908 348 aaPredicted RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 DAG1Q14118 895 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 TMIGD1Q6UXZ0 262 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 AQP12AQ8IXF9 295 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 NKD1Q969G9 470 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 PLEKHA1Q9HB21 404 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 RIMKLBQ9ULI2 386 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 SQORQ9Y6N5 450 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 C2orf78A6NCI8 922 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 GNSP15586 552 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 HERC3Q15034 1050 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 ABHD13Q7L211 337 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 GALNTL5Q7Z4T8 443 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 LNX2Q8N448 690 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 IRF7Q92985 503 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 M0QX08 132 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 WNT7BP56706 349 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 BLMHQ13867 455 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 TXNDC5Q8NBS9 432 aaKnown RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 DSN1Q9H410 356 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 NLE1Q9NVX2 485 aaPredicted RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 GMEB2Q9UKD1 530 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 GLOD5A6NK44 160 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 B4GALT2O60909 372 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 PGRP06401 933 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 POLR2J2Q9GZM3 115 aaKnown RBP12.46□□□□□ -0.41
CHD4-211ENST00000544484 SNTG1Q9NSN8 517 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 P2RX2Q9UBL9 471 aa12.46□□□□□ -0.41
CHD4-211ENST00000544484 SDK1Q7Z5N4 2213 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 DUXAA6NLW8 204 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 ETV3P41162 512 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 TMEM115Q12893 351 aaPredicted RBP12.46□□□□□ -0.42
CHD4-211ENST00000544484 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.42
CHD4-211ENST00000544484 TMEM40Q8WWA1 233 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 KXD1Q9BQD3 176 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 TRBC2A0A5B9 178 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 PRAMEF12O95522 483 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 DHFRP00374 187 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 RHOP08100 348 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 ZNF823P16415 610 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 PPP1R3AQ16821 1122 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 EIPR1Q53HC9 387 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 CEACAM20Q6UY09 585 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 TICAM1Q8IUC6 712 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 DNAJB8Q8NHS0 232 aa12.46□□□□□ -0.42
CHD4-211ENST00000544484 NKX1-2Q9UD57 310 aaPredicted RBP12.46□□□□□ -0.42
CHD4-211ENST00000544484 ELOA3DA6NLF2 546 aaPredicted RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 BTN3A3O00478 584 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ABLIM1O14639 778 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 DLDP09622 509 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 CBSLP0DN79 551 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 NDUFS1P28331 727 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 CBSP35520 551 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 SYT16Q17RD7 645 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ELOA3BQ3SY89 546 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 NUP54Q7Z3B4 507 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 SLC22A15Q8IZD6 547 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ELOA3Q8NG57 546 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms