RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ANKRD7Q92527 254 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 VPS39Q96JC1 886 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 ZFYVE21Q9BQ24 234 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 C17orf62Q9BQA9 187 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 DHRS4Q9BTZ2 278 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 SYNPO2LQ9H987 977 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 POPDC3Q9HBV1 291 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 SLC22A11Q9NSA0 550 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 STARD5Q9NSY2 213 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 TUBD1Q9UJT1 453 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 IKZF3Q9UKT9 509 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 SNX7Q9UNH6 387 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 POLHQ9Y253 713 aa14.79□□□□□ -0.04
ECHDC2-223ENST00000542552 CCDC88CQ9P219 2028 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CDC14CA4D256 554 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 DSCR3O14972 297 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 KLF7O75840 302 aaPredicted RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 ENO2P09104 434 aaPredicted RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 AP1S2P56377 157 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 VSX2P58304 361 aaPredicted RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 TBPL1P62380 186 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 TSTA3Q13630 321 aaPredicted RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 PPP1R3AQ16821 1122 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 PRTGQ2VWP7 1150 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 NKAIN1Q4KMZ8 207 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 WASHC2DQ5SRD0 308 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 MRPL14Q6P1L8 145 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 AGTRAPQ6RW13 159 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 SBSNQ6UWP8 590 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 NKAPQ8N5F7 415 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 MNS1Q8NEH6 495 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 THAP4Q8WY91 577 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CDKL2Q92772 493 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CPNE1Q99829 537 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 SGPP1Q9BX95 441 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 PCBD2Q9H0N5 130 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CCDC177Q9NQR7 707 aaPredicted RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 TXLNGQ9NUQ3 528 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 DMGDHQ9UI17 866 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 NOVA2Q9UNW9 492 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 MTO1Q9Y2Z2 717 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 SPTA1P02549 2419 aa14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 HELZ2Q9BYK8 2649 aaKnown RBP14.78□□□□□ -0.04
ECHDC2-223ENST00000542552 A0A0J9YVX5 310 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 A0A1B0GX78 115 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 C9J4A7 227 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 H0YGG7 62 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 MED26O95402 600 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HIST1H2AGP0C0S8 130 aaPredicted RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 EZRP15311 586 aaKnown RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HIST1H2ADP20671 130 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 SAT1P21673 171 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HRH2P25021 359 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 EMP3P54852 163 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 ARF3P61204 181 aaPredicted RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 POU4F1Q01851 419 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 C19orf57Q0VDD7 668 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 KCNAB2Q13303 367 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 ZNF460Q14592 562 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 FAM214AQ32MH5 1076 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 FAM69BQ5VUD6 431 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 TTLL10Q6ZVT0 673 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 APLFQ8IW19 511 aaPredicted RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 OR56A3Q8NH54 315 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 ANKRD49Q8WVL7 239 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 FBXL8Q96CD0 374 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HIST1H2AHQ96KK5 128 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 OR2A5Q96R48 311 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 GPR22Q99680 433 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 RBBP8Q99708 897 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HIST1H2AJQ99878 128 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 H2AFJQ9BTM1 129 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 FAM129AQ9BZQ8 928 aa14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 CUEDC1Q9NWM3 386 aaPredicted RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 UTP6Q9NYH9 597 aaKnown RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 SPENQ96T58 3664 aaKnown RBP14.77□□□□□ -0.05
ECHDC2-223ENST00000542552 HYKKA2RU49 373 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 CNOT3O75175 753 aaKnown RBP14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 CD63P08962 238 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 NPPBP16860 134 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 ALAS2P22557 587 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 CCND1P24385 295 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 GP5P40197 560 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 NAE1Q13564 534 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 COL9A2Q14055 689 aaPredicted RBP14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 KBTBD12Q3ZCT8 623 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 GLE1Q53GS7 698 aaKnown RBP14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 THEMIS2Q5TEJ8 643 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 PRAMEF13Q5VWM6 474 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 MLIPQ5VWP3 458 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 RELL1Q8IUW5 271 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 ARHGEF39Q8N4T4 335 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 TTC29Q8NA56 475 aaPredicted RBP14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 KIF18AQ8NI77 898 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 FKBP10Q96AY3 582 aa14.76□□□□□ -0.05
ECHDC2-223ENST00000542552 TRIM54Q9BYV2 358 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms