RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 MIF4GDA9UHW6 222 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 FOXS1O43638 330 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 ERGP11308 486 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 RPL22P35268 128 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 FDFT1P37268 417 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 PER3P56645 1201 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 MAT1AQ00266 395 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 OCA2Q04671 838 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 PCOLCEQ15113 449 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 TMED2Q15363 201 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 SIX1Q15475 284 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 NDUFAF7Q7L592 441 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 KIAA1328Q86T90 577 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 PAQR7Q86WK9 346 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 KBTBD2Q8IY47 623 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 SLC34A3Q8N130 599 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 PPFIBP2Q8ND30 876 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 PPHLN1Q8NEY8 458 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 COG1Q8WTW3 980 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 RELTQ969Z4 430 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 CCDC120Q96HB5 630 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 CABS1Q96KC9 395 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 TTC1Q99614 292 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 SLC30A3Q99726 388 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 ZFYVE21Q9BQ24 234 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 TSSK1BQ9BXA7 367 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 RAB11FIP5Q9BXF6 653 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 TRPC4Q9UBN4 977 aa14.7□□□□□ -0.06
CLSTN3-213ENST00000541953 E7EVH7 732 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 WDPCPO95876 746 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 RPS3P23396 243 aaKnown RBP eCLIP14.69□□□□□ -0.066e-7■■■□□ 15.3
CLSTN3-213ENST00000541953 CARSP49589 748 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 TTPAP49638 278 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 EMP2P54851 167 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 DSG2Q14126 1118 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 MUM1Q2TAK8 710 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 ACSBG2Q5FVE4 666 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 PRMT9Q6P2P2 845 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 OTOAQ7RTW8 1153 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 PLD3Q8IV08 490 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 ZC3H7AQ8IWR0 971 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 LPGAT1Q92604 370 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 MFSD3Q96ES6 412 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 SYBUQ9NX95 663 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 IL1RAPL1Q9NZN1 696 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 COPG2Q9UBF2 871 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 GNPTGQ9UJJ9 305 aa14.69□□□□□ -0.06
CLSTN3-213ENST00000541953 PKDREJQ9NTG1 2253 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 F8P00451 2351 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 ZFHX3Q15911 3703 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PCNX1Q96RV3 2341 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 A0A0A6YYC8 382 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 IGHV3-20A0A0C4DH32 117 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 TCRBV7S3A2A0A539 114 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 OR2W5A6NFC9 320 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 I3L1I5 382 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 USP1O94782 785 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 FKBP9O95302 570 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 IPO7O95373 1038 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 MATN4O95460 622 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 GAS8O95995 478 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SERPINA7P05543 415 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SNRPB2P08579 225 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 FMO4P31512 558 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 KCNJ11Q14654 390 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 CDSNQ15517 529 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SKOR2Q2VWA4 1001 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 AARS2Q5JTZ9 985 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PCID2Q5JVF3 399 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 ZNF425Q6IV72 752 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 GFRALQ6UXV0 394 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PRSS41Q7RTY9 318 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SLC13A5Q86YT5 568 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 CSNK1A1LQ8N752 337 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 HAS2Q92819 552 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PEX13Q92968 403 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PANX3Q96QZ0 392 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 OR2A5Q96R48 311 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 YIPF2Q9BWQ6 316 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SPATA7Q9P0W8 599 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 SH3BGRL2Q9UJC5 107 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 ANAPC5Q9UJX4 755 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 ZNF148Q9UQR1 794 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 HIVEP1P15822 2718 aa14.68□□□□□ -0.06
CLSTN3-213ENST00000541953 NCOA6Q14686 2063 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 LOC102723996A0A087X1L8 192 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 TRAV17A0A0B4J275 112 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 A0A1B0GUH1 482 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 F8W8V4 182 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 UNC5CO95185 931 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 ERVK-10P10266 1014 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 PTMSP20962 102 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 ELAVL4P26378 380 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 MGAT1P26572 445 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 STIP1P31948 543 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 SLC26A3P40879 764 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 TSTA3Q13630 321 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 LRRC8BQ6P9F7 803 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms