RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 INSIG1O15503 277 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SELENOFO60613 162 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TMEM127O75204 238 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GGCTO75223 188 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MED6O75586 246 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SLC22A3O75751 556 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PIAS2O75928 621 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ABLIM3O94929 683 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PAPSS2O95340 614 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ZIC2O95409 532 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HSPA4LO95757 839 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SCGB1D2O95969 90 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HPRP00739 348 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 F9P00740 461 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ADAP00813 363 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C9P02748 559 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ALPLP05186 524 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C2P06681 752 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GPIP06744 558 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HEXAP06865 529 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 FGF2P09038 288 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SNRPA1P09661 255 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 OR56A5P0C7T3 313 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CD1EP15812 388 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SPNP16150 400 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 IGFBP5P24593 272 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MAPK1P28482 360 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CALCRP30988 508 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HOXA9P31269 272 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GRIA1P42261 906 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MAGEA2P43356 314 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 BRCC3P46736 316 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TGM4P49221 684 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GMPSP49915 693 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CCR4P51679 360 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 LIMK2P53671 638 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ARSFP54793 590 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CASP6P55212 293 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ANTXR2P58335 489 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CXCR4P61073 352 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PKIAP61925 76 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ARID5AQ03989 594 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PTPN11Q06124 597 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ECH1Q13011 328 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TP53BP2Q13625 1128 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 KRT33BQ14525 404 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SF1Q15637 639 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ATP6AP1Q15904 470 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 LRRC26Q2I0M4 334 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HFEQ30201 348 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TIMM50Q3ZCQ8 353 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TMEM35AQ53FP2 167 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SAMD4BQ5PRF9 694 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SYT6Q5T7P8 510 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C9orf131Q5VYM1 1079 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MAP1SQ66K74 1059 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 KDM4DQ6B0I6 523 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ABLIM2Q6H8Q1 611 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 JADE1Q6IE81 842 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C1orf94Q6P1W5 598 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 HAGHLQ6PII5 290 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PLET1Q6UQ28 207 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 UQCC3Q6UW78 93 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 TRILQ7L0X0 811 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 G2E3Q7L622 706 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 RAB44Q7Z6P3 723 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 FAM160B2Q86V87 743 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MON1AQ86VX9 555 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ZC3HC1Q86WB0 502 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 DHFR2Q86XF0 187 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C10orf107Q8IVU9 208 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ZBTB8OSQ8IWT0 167 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 UNC5BQ8IZJ1 945 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ZDHHC14Q8IZN3 488 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SVBPQ8N300 66 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GUF1Q8N442 669 aaKnown RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 MEIOBQ8N635 442 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 UBR7Q8N806 425 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 POMGNT2Q8NAT1 580 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GLIS1Q8NBF1 620 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GLB1L3Q8NCI6 653 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 BEND2Q8NDZ0 799 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 BBS1Q8NFJ9 593 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 OR2T34Q8NGX1 318 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 FBXO27Q8NI29 283 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 UBA3Q8TBC4 463 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GRIN3AQ8TCU5 1115 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 PAQR8Q8TEZ7 354 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 CYGBQ8WWM9 190 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 GATAD2BQ8WXI9 593 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 C22orf15Q8WYQ4 148 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 KCTD13Q8WZ19 329 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 KIAA1143Q96AT1 154 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-218ENST00000541615 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 LGALS12Q96DT0 336 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 YIPF6Q96EC8 236 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 SCMH1Q96GD3 660 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 KAZALD1Q96I82 304 aa5.06□□□□□ -1.6
SNHG1-218ENST00000541615 FAM84AQ96KN4 292 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms