RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RAB15P59190 212 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TOP3AQ13472 1001 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ACOX1Q15067 660 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM214AQ32MH5 1076 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 NEK5Q6P3R8 708 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZSWIM9Q86XI8 627 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PTOV1Q86YD1 416 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TMEM132CQ8N3T6 1108 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FBLIM1Q8WUP2 373 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATL1Q8WXF7 558 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SH3KBP1Q96B97 665 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 COPS4Q9BT78 406 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ADGRE3Q9BY15 652 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 OSGIN1Q9UJX0 560 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 NDRG4Q9ULP0 352 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC22A14Q9Y267 594 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TNPO3Q9Y5L0 923 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 MYOFQ9NZM1 2061 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 J3KTA2 159 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 FPGTO14772 594 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 STK16O75716 305 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 UPK1BO75841 260 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 KCNK5O95279 499 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 PTHP01270 115 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 FABP3P05413 133 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 CHRM5P08912 532 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 ITGAMP11215 1152 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 CACNG1Q06432 222 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 KCNA10Q16322 511 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 UBE2UQ5VVX9 321 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 GATAD2AQ86YP4 633 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZBTB2Q8N680 514 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 SCAIQ8N9R8 606 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 UTP15Q8TED0 518 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 DMRTB1Q96MA1 342 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC22A12Q96S37 553 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 TP63Q9H3D4 680 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 ELOVL6Q9H5J4 265 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 IL1RAPQ9NPH3 570 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NECTIN3Q9NQS3 549 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 LHX3Q9UBR4 397 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 RAPGEFL1Q9UHV5 662 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 CRLS1Q9UJA2 301 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 PCDHGA6Q9Y5G7 932 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 PLXNA3P51805 1871 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 SMIM30A4D0T7 59 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 TTC36A6NLP5 189 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 GFRA2O00451 464 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 WDR47O94967 919 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 AKR1A1P14550 325 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 BPIP17213 487 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 AZGP1P25311 298 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 RRM2P31350 389 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 COPZ1P61923 177 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NPRL3Q12980 569 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NFATC2Q13469 925 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 BOP1Q14137 746 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NXNL2Q5VZ03 156 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 SERPINA13PQ6UXR4 307 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZZZ3Q8IYH5 903 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 S100ZQ8WXG8 99 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 RERGLQ9H628 205 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NMRK2Q9NPI5 230 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 RHCGQ9UBD6 479 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 OARD1Q9Y530 152 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 NOX1Q9Y5S8 564 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 MYO7AQ13402 2215 aa10.05□□□□□ -0.8
CDC42SE1-207ENST00000540998 DYTNA2CJ06 578 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 M0QX08 132 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CTDSP2O14595 271 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CELF2O95319 508 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 LAMP1P11279 417 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 SERPINB10P48595 397 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 RPIAP49247 311 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLCN4P51793 760 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PPP5CP53041 499 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 DMPKQ09013 629 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TIGD6Q17RP2 521 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF404Q494X3 552 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 KIAA1614Q5VZ46 1190 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATG9BQ674R7 924 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 NCEH1Q6PIU2 408 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 AKAP14Q86UN6 197 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 APCDD1Q8J025 514 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PARP16Q8N5Y8 322 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 GPR156Q8NFN8 814 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR9Q2Q8NGE9 314 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PHF10Q8WUB8 498 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 FEVQ99581 238 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CDADC1Q9BWV3 514 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms