RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 UTP6Q9NYH9 597 aaKnown RBP11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 BFARQ9NZS9 450 aa11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 RUVBL2Q9Y230 463 aaKnown RBP11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 DRG1Q9Y295 367 aaKnown RBP11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 MRPS2Q9Y399 296 aaKnown RBP11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 CAPN6Q9Y6Q1 641 aa11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 DOCK10Q96BY6 2186 aa11.43□□□□□ -0.58
CBX3P4-202ENST00000540428 LOC102723996A0A087X1L8 192 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 IDSB3KWA1 339 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 H0YGG7 62 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 MYO1CO00159 1063 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 TXNDC9O14530 226 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 NRP2O60462 931 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ESR1P03372 595 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ICAM2P13598 275 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 PKMP14618 531 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 RPL22P35268 128 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 SLC26A3P40879 764 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 EIF3BP55884 814 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 SESN2P58004 480 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ARF3P61204 181 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ART3Q13508 389 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 FASTKQ14296 549 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 NAA30Q147X3 362 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 TYSND1Q2T9J0 566 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ANKRD20A4Q4UJ75 823 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 ARMC3Q5W041 872 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 SP5Q6BEB4 398 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 DRICH1Q6PGQ1 229 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 SDCCAG8Q86SQ7 713 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 PRUNE1Q86TP1 453 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 FJX1Q86VR8 437 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 CSNK1A1LQ8N752 337 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 BRIX1Q8TDN6 353 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 C1orf54Q8WWF1 131 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 LPGAT1Q92604 370 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 MAGEB10Q96LZ2 347 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 MESP1Q9BRJ9 268 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 KIFC1Q9BW19 673 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 MRPS30Q9NP92 439 aaKnown RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 MKKSQ9NPJ1 570 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 PTGFRNQ9P2B2 879 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 COPG2Q9UBF2 871 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 KLF2Q9Y5W3 355 aaPredicted RBP11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
CBX3P4-202ENST00000540428 KRT87PA6NCN2 255 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ZNF839A8K0R7 811 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 PRSS44E7EML9 344 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 PSIP1O75475 530 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 WFS1O76024 890 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CCNDBP1O95273 360 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CRYABP02511 175 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 HEXBP07686 556 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CYC1P08574 325 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ANXA5P08758 320 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 MYBL2P10244 700 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 EZRP15311 586 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ARNTP27540 789 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 NMBRP28336 390 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 RPA3P35244 121 aaPredicted RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CDK16Q00536 496 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 PRDX1Q06830 199 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 SNX1Q13596 522 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CCNG2Q16589 344 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ZNF425Q6IV72 752 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 PAQR7Q86WK9 346 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 SRRM1Q8IYB3 904 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 OTUD6BQ8N6M0 293 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 AMER3Q8N944 861 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 DNAJB8Q8NHS0 232 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 MOCOSQ96EN8 888 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 OR2A5Q96R48 311 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 TAAR6Q96RI8 345 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 DESI2Q9BSY9 194 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ACAT2Q9BWD1 397 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ZNF700Q9H0M5 742 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 FAM114A2Q9NRY5 505 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 ABI3Q9P2A4 366 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 STOX2Q9P2F5 926 aaPredicted RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 RUVBL1Q9Y265 456 aaKnown RBP11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CROCCQ5TZA2 2017 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 CENPEQ02224 2701 aa11.41□□□□□ -0.58
CBX3P4-202ENST00000540428 IGKV1-8A0A0C4DH67 115 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 A0A0U1RQJ8 604 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ARHGAP10A1A4S6 786 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ARHGEF33A8MVX0 844 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 NIPSNAP2O75323 286 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 VAPBO95292 243 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 CATP04040 527 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ZSCAN5DPP0CG00 497 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 CHRM3P20309 590 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 OGNP20774 298 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ELAVL4P26378 380 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms