RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 H0YGG7 62 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ADAM10O14672 748 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 NRP2O60462 931 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 APOA4P06727 396 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ERVK-10P10266 1014 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 RBP3P10745 1247 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ABOP16442 354 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 FOXN2P32314 431 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ARF3P61204 181 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 TPM4P67936 248 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ACER2Q5QJU3 275 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 KCTD11Q693B1 232 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 H3F3CQ6NXT2 135 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 DARS2Q6PI48 645 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 MMP21Q8N119 569 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 EID3Q8N140 333 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 BEST3Q8N1M1 668 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 AMER3Q8N944 861 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 MDS2Q8NDY4 140 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 OR2A1Q8NGT9 310 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 HMGCLL1Q8TB92 370 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 MMABQ96EY8 250 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 DMRTA2Q96SC8 542 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 DNAJC7Q99615 494 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 CARD6Q9BX69 1037 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 TSSK1BQ9BXA7 367 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 TSPAN10Q9H1Z9 355 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 COQ3Q9NZJ6 369 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 TNFRSF10DQ9UBN6 386 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 INTUQ9ULD6 942 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 MKL2Q9ULH7 1088 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 GTF3C1Q12789 2109 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 OR2A25A4D2G3 310 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 FOXO6A8MYZ6 492 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 FAM155BO75949 473 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 TSPAN12O95859 305 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 ANXA5P08758 320 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 C8orf89P0DMQ9 161 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 CD46P15529 392 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 IGFBP2P18065 325 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 PSMB5P28074 263 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 EEF1DP29692 281 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 CD96P40200 585 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 MARCKSL1P49006 195 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 EIF3EP60228 445 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 TUBA3CQ13748 450 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 NAA25Q14CX7 972 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 PARP6Q2NL67 630 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 TUBA3EQ6PEY2 450 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 SIAH3Q8IW03 269 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 GHDCQ8N2G8 530 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 RAB42Q8N4Z0 105 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 METTL21AQ8WXB1 218 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 SCMH1Q96GD3 660 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 CHP1Q99653 195 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 UTP23Q9BRU9 249 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 TRIM51Q9BSJ1 452 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 KLHL1Q9NR64 748 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 MRFAP1Q9Y605 127 aa11.01□□□□□ -0.65
CLSTN3-209ENST00000539982 A0A1B0GTL3 188 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 A0A1W2PPV9 198 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 IQCF5A8MTL0 148 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 PRRG2O14669 202 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 PHF2O75151 1096 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 CTNNA2P26232 953 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 AOAHP28039 575 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 DNAJA1P31689 397 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 EFNA3P52797 238 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 COPS2P61201 443 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 YBX1P67809 324 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 OR1C1Q15619 314 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 MEP1AQ16819 746 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 BTBD16Q32M84 506 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 GARNL3Q5VVW2 1013 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 FCRLBQ6BAA4 426 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 PLAG1Q6DJT9 500 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 SPINK14Q6IE38 97 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 LRRC8BQ6P9F7 803 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 C3P1Q6ZMU1 363 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 CPEB2Q7Z5Q1 589 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 LUZP1Q86V48 1076 aa11□□□□□ -0.65
CLSTN3-209ENST00000539982 ZC3H7AQ8IWR0 971 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 CHERPQ8IWX8 916 aaKnown RBP11□□□□□ -0.65
CLSTN3-209ENST00000539982 CSNK1A1LQ8N752 337 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms