RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PAQR7Q86WK9 346 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 SPNS2Q8IVW8 549 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 INPP5DQ92835 1189 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 ASIC3Q9UHC3 531 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 DHRS7Q9Y394 339 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 HS3ST3B1Q9Y662 390 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 USP9YO00507 2555 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-206ENST00000539320 COL12A1Q99715 3063 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 VSTM2BA6NLU5 285 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 H0YGG7 62 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 SOCS6O14544 535 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 SYF2O95926 243 aaKnown RBP21.19■□□□□ 0.98
SCARB1-206ENST00000539320 GNLYP22749 145 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 ITGA3P26006 1051 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 ARF3P61204 181 aaPredicted RBP21.19■□□□□ 0.98
SCARB1-206ENST00000539320 CRYMQ14894 314 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 RBBP7Q16576 425 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 HSP90AA5PQ58FG0 334 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 CPNE9Q8IYJ1 553 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 PPFIBP2Q8ND30 876 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 ZNF480Q8WV37 535 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 ASB11Q8WXH4 323 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 TM9SF4Q92544 642 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 COL26A1Q96A83 441 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 CABS1Q96KC9 395 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 AARSD1Q9BTE6 412 aaKnown RBP21.19■□□□□ 0.98
SCARB1-206ENST00000539320 CRB3Q9BUF7 120 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 GRPEL1Q9HAV7 217 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 ZNF304Q9HCX3 659 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 SEMA3GQ9NS98 782 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 IARS2Q9NSE4 1012 aaKnown RBP21.19■□□□□ 0.98
SCARB1-206ENST00000539320 UTP6Q9NYH9 597 aaKnown RBP21.19■□□□□ 0.98
SCARB1-206ENST00000539320 DOCK10Q96BY6 2186 aa21.19■□□□□ 0.98
SCARB1-206ENST00000539320 IGKV1-8A0A0C4DH67 115 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 CYSRT1A8MQ03 144 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 E7ENX8 843 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 SMAPO00193 183 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 EIF3FO00303 357 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 DNALI1O14645 258 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 FBLP22087 321 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 VARSP26640 1264 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 TAP2Q03519 686 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 PRDX1Q06830 199 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 PTK6Q13882 451 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 TUBB8Q3ZCM7 444 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 ZNF425Q6IV72 752 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 FBXO42Q6P3S6 717 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 PIWIL4Q7Z3Z4 852 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 CSNK1A1LQ8N752 337 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 VPS50Q96JG6 964 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 SLC29A3Q9BZD2 475 aa21.18■□□□□ 0.98
SCARB1-206ENST00000539320 DDX47Q9H0S4 455 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 TRMT6Q9UJA5 497 aaKnown RBP21.18■□□□□ 0.98
SCARB1-206ENST00000539320 MDC1Q14676 2089 aaKnown RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 GFYI3L273 518 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 ZBTB14O43829 449 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 ALOX12BO75342 701 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 HAUS5O94927 633 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 EZRP15311 586 aaKnown RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 EMP3P54852 163 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 ABATP80404 500 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 OCA2Q04671 838 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 PRAMEF13Q5VWM6 474 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 KIRREL2Q6UWL6 708 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 IGFL3Q6UXB1 125 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 CYHR1Q6ZMK1 362 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 IQCKQ8N0W5 287 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 STT3BQ8TCJ2 826 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 KCNF1Q9H3M0 494 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 TRMT1Q9NXH9 659 aaKnown RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 STOX2Q9P2F5 926 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 MAP10Q9P2G4 905 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 ZNF282Q9UDV7 671 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 PCYOX1Q9UHG3 505 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 RUVBL1Q9Y265 456 aaKnown RBP21.17■□□□□ 0.98
SCARB1-206ENST00000539320 B3GNT3Q9Y2A9 372 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 HIVEP3Q5T1R4 2406 aa21.17■□□□□ 0.98
SCARB1-206ENST00000539320 PRPF4O43172 522 aaKnown RBP eCLIP21.16■□□□□ 0.987e-7■■□□□ 11.9
SCARB1-206ENST00000539320 TTC4O95801 387 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 IMPA1P29218 277 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 SKIV2L2P42285 1042 aaKnown RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 CARSP49589 748 aaKnown RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 DHX9Q08211 1270 aaKnown RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 THEMIS2Q5TEJ8 643 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 IRAK1BP1Q5VVH5 260 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 LRRC8EQ6NSJ5 796 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 UBE2R2Q712K3 238 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 ADCK2Q7Z695 626 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 LRRC56Q8IYG6 542 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 PRSS58Q8IYP2 241 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 C2CD4AQ8NCU7 369 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 GABPB2Q8TAK5 448 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 SLCO2A1Q92959 643 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 RERGQ96A58 199 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 MIEF2Q96C03 454 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 MVB12AQ96EY5 273 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 ILKAPQ9H0C8 392 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-206ENST00000539320 SYNPO2LQ9H987 977 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 ABCF3Q9NUQ8 709 aa21.16■□□□□ 0.98
SCARB1-206ENST00000539320 CDC14AQ9UNH5 594 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms