RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IGKV1-8A0A0C4DH67 115 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 TCRBV7S3A2A0A539 114 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 H0YGG7 62 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 MAP2K7O14733 419 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PFDN6O15212 129 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PHF2O75151 1096 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 VPS26AO75436 327 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PSIP1O75475 530 aaKnown RBP11.92□□□□□ -0.5
VAMP1-206ENST00000538970 CHRM3P20309 590 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
VAMP1-206ENST00000538970 EMP3P54852 163 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ARF3P61204 181 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-206ENST00000538970 CDC16Q13042 620 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 MFAP5Q13361 173 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 TLR1Q15399 786 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ANKRD20A4Q4UJ75 823 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ACSBG2Q5FVE4 666 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ATG9BQ674R7 924 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 SUSD1Q6UWL2 747 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ISLR2Q6UXK2 745 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 CENPUQ71F23 418 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PAQR7Q86WK9 346 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PRSS58Q8IYP2 241 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 OR9A1PQ8NGU1 263 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 GRHL3Q8TE85 626 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 MAIP1Q8WWC4 291 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 C8orf44Q96CB5 159 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 CABS1Q96KC9 395 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF160Q9HCG1 818 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 MRPS30Q9NP92 439 aaKnown RBP11.92□□□□□ -0.5
VAMP1-206ENST00000538970 FAM114A2Q9NRY5 505 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 GALPQ9UBC7 116 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 C3orf18Q9UK00 162 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 CRYL1Q9Y2S2 319 aa11.92□□□□□ -0.5
VAMP1-206ENST00000538970 A0A1W2PQ72 361 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 GOLGA6L6A8MZA4 724 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 AVILO75366 819 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 KLHL18O94889 574 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 COX6A1P12074 109 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 EDN3P14138 238 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 PKMP14618 531 aaKnown RBP11.91□□□□□ -0.5
VAMP1-206ENST00000538970 RPA3P35244 121 aaPredicted RBP11.91□□□□□ -0.5
VAMP1-206ENST00000538970 DSG2Q14126 1118 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 ARHGAP19Q14CB8 494 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 VWA2Q5GFL6 755 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 ARMC3Q5W041 872 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF425Q6IV72 752 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 LINC00696Q6ZRV3 163 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 CILP2Q8IUL8 1156 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 FAR1Q8WVX9 515 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 MVB12AQ96EY5 273 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
VAMP1-206ENST00000538970 LZTFL1Q9NQ48 299 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 TAC3Q9UHF0 121 aa11.91□□□□□ -0.5
VAMP1-206ENST00000538970 RUVBL1Q9Y265 456 aaKnown RBP11.91□□□□□ -0.5
VAMP1-206ENST00000538970 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ANKRD12Q6UB98 2062 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 NSG1A0A0A6YYJ2 146 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 IDSB3KWA1 339 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 E5RI56 91 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 FFAR3O14843 346 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 GPR42O15529 346 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 PRPF4O43172 522 aaKnown RBP eCLIP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 USP1O94782 785 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 CATP04040 527 aaKnown RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 PAMP19021 973 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 SOX11P35716 441 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 MAGEA6P43360 314 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 CLCN7P51798 805 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 TERF1P54274 439 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 PNLIPRP1P54315 467 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 HKDC1Q2TB90 917 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ICE2Q659A1 982 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 NEPROQ6NW34 567 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 RPUSD3Q6P087 351 aaKnown RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF662Q6ZS27 426 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 NDUFAF7Q7L592 441 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 KBTBD2Q8IY47 623 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ADGRG4Q8IZF6 3080 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 AMER3Q8N944 861 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 PRELID2Q8N945 189 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 FBXO15Q8NCQ5 510 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 CATSPER1Q8NEC5 780 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF480Q8WV37 535 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 LMF1Q96S06 567 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 PKP4Q99569 1192 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 SLC30A3Q99726 388 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 SLX1AQ9BQ83 275 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms