RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 GDF5P43026 501 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CCL7P80098 99 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 GPLD1P80108 840 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 GTF2H2Q13888 395 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 AMZ1Q400G9 498 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CLEC6AQ6EIG7 209 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 GTF2H2CQ6P1K8 395 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 AGTRAPQ6RW13 159 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 SYTL1Q8IYJ3 562 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 TCAIMQ8N3R3 496 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 TEX9Q8N6V9 391 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 ERP27Q96DN0 273 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 FAR2Q96K12 515 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 PPP1R36Q96LQ0 422 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 KCNA7Q96RP8 456 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 NUF2Q9BZD4 464 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CD244Q9BZW8 370 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 ATG10Q9H0Y0 220 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 LRRN3Q9H3W5 708 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 EPB41L1Q9H4G0 881 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 SPHK1Q9NYA1 384 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 LNPEPQ9UIQ6 1025 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 ADAMTS20P59510 1910 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 SPAARA0A1B0GVQ0 90 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 E7ENX8 843 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 FCHO1O14526 889 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 AZIN1O14977 448 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 UBOX5O94941 541 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 MLYCDO95822 493 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 POLR2CP19387 275 aaPredicted RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 HSD17B2P37059 387 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 SLC6A12P48065 614 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 FOXA1P55317 472 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 PPP1CAP62136 330 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 TBPL1P62380 186 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 TAP2Q03519 686 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 CFHR1Q03591 330 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 BTKQ06187 659 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 RSPO4Q2I0M5 234 aaPredicted RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 SPRED3Q2MJR0 410 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 KANK2Q63ZY3 851 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 MTDHQ86UE4 582 aaKnown RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 AFAP1L2Q8N4X5 818 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 FLVCR1-AS1Q8TAF5 88 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 ATL1Q8WXF7 558 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 SMPDL3AQ92484 453 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 RILPQ96NA2 401 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 OR52B2Q96RD2 323 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 ZNF382Q96SR6 550 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 WDR55Q9H6Y2 383 aaPredicted RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 SYNDIG1Q9H7V2 258 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 NOL11Q9H8H0 719 aaKnown RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 HRASLS2Q9NWW9 162 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 ACTR10Q9NZ32 417 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 ZNF225Q9UK10 706 aa16.61■□□□□ 0.25
CLN6-202ENST00000538696 ATXN7L1Q9ULK2 861 aaPredicted RBP16.61■□□□□ 0.25
CLN6-202ENST00000538696 HEATR5BQ9P2D3 2071 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GOLGA8QA0A0J9YX86 632 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GSAPA4D1B5 854 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GOLGA8OA6NCC3 632 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 ZNF839A8K0R7 811 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GOLGA8NF8WBI6 632 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 K7EPI3 171 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 SDHDO14521 159 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 OR7A17O14581 309 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GIPC1O14908 333 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 ZW10O43264 779 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 PRICKLE3O43900 615 aaPredicted RBP16.6■□□□□ 0.25
CLN6-202ENST00000538696 STK16O75716 305 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 PSMB5P28074 263 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GGT5P36269 586 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 PPM1FP49593 454 aaPredicted RBP16.6■□□□□ 0.25
CLN6-202ENST00000538696 HNMTP50135 292 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GFERP55789 205 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 HNRNPH2P55795 449 aaKnown RBP16.6■□□□□ 0.25
CLN6-202ENST00000538696 TRAF3Q13114 568 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 ILKQ13418 452 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 NAE1Q13564 534 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 CCDC157Q569K6 752 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 KLHL35Q6PF15 583 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 SUSD1Q6UWL2 747 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 CCDC121Q6ZUS5 278 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 GPRIN3Q6ZVF9 776 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 LRRC70Q7Z2Q7 622 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 KLHDC8AQ8IYD2 350 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 CLYBLQ8N0X4 340 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 OR52B6Q8NGF0 335 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 OR56A3Q8NH54 315 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 AHCYL2Q96HN2 611 aaKnown RBP16.6■□□□□ 0.25
CLN6-202ENST00000538696 NUDT22Q9BRQ3 303 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 NMUR2Q9GZQ4 415 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 ZFP69BQ9UJL9 534 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 APOBEC2Q9Y235 224 aaKnown RBP16.6■□□□□ 0.25
CLN6-202ENST00000538696 ANGPTL3Q9Y5C1 460 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 PCDHGA1Q9Y5H4 931 aa16.6■□□□□ 0.25
CLN6-202ENST00000538696 MN1Q10571 1320 aaPredicted RBP16.59■□□□□ 0.25
CLN6-202ENST00000538696 PIPSLA2A3N6 862 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 NTN3O00634 580 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms