RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ATP1B2P14415 290 aaPredicted RBP13.89□□□□□ -0.19
USP44-203ENST00000537435 JUPP14923 745 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 ACPPP15309 386 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 HNRNPFP52597 415 aaKnown RBP13.89□□□□□ -0.19
USP44-203ENST00000537435 WNT3P56703 355 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 VLDLRP98155 873 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 ITGADQ13349 1161 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 KDM4DQ6B0I6 523 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 C22orf39Q6P5X5 142 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 HTR3DQ70Z44 454 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 IGFN1Q86VF2 1251 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
USP44-203ENST00000537435 MCCC1Q96RQ3 725 aaPredicted RBP13.89□□□□□ -0.19
USP44-203ENST00000537435 ERGIC3Q9Y282 383 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 GMPPBQ9Y5P6 360 aa13.89□□□□□ -0.19
USP44-203ENST00000537435 GFYI3L273 518 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SCN2BO60939 215 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SULT1C4O75897 302 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CPSF4O95639 269 aaKnown RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 UGT2B4P06133 528 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 COX7A2P14406 83 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 FPR1P21462 350 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 KDELR2P33947 212 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 MAP2K4P45985 399 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SPINT3P49223 89 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PFN3P60673 137 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SP140Q13342 867 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 KEAP1Q14145 624 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 ACOX1Q15067 660 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 NPTX1Q15818 432 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 HORMAD1Q86X24 394 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CLECL1Q8IZS7 167 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CDC26Q8NHZ8 85 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 RORBQ92753 470 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SH3YL1Q96HL8 342 aaPredicted RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 MYOCQ99972 504 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 DPH2Q9BQC3 489 aaPredicted RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 BRD9Q9H8M2 597 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 B4GALT6Q9UBX8 382 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 RPS6KA6Q9UK32 745 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 ERVK-11Q9UQG0 969 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 TPRKBQ9Y3C4 175 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PCDHGA10Q9Y5H3 936 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SERTM1A2A2V5 107 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 MAGEB17A8MXT2 336 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SLC16A5O15375 505 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 AOC2O75106 756 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 GABARAPO95166 117 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 FKBP9O95302 570 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 FUCA1P04066 466 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SEMG1P04279 462 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 GPX2P18283 190 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CD6P30203 668 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 IDUAP35475 653 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SLC35A2P78381 396 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 IRF8Q02556 426 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 SRSF11Q05519 484 aaKnown RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 RGS21Q2M5E4 152 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PLEKHS1Q5SXH7 462 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PTOV1Q86YD1 416 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 CMTM8Q8IZV2 173 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 PGBD3Q8N328 593 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 TMCO5AQ8N6Q1 288 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
USP44-203ENST00000537435 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 ZNF347Q96SE7 839 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 DOLKQ9UPQ8 538 aa13.88□□□□□ -0.19
USP44-203ENST00000537435 FUOMA2VDF0 154 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 CXCL10P02778 98 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 URODP06132 367 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 PCSK2P16519 638 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 JUNDP17535 347 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 CD22P20273 847 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 HLA-FP30511 346 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 AP1S2P56377 157 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 OCA2Q04671 838 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 DDX39BQ13838 428 aaKnown RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 SF1Q15637 639 aaKnown RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 TTC29Q8NA56 475 aaPredicted RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 HSH2DQ96JZ2 352 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 HERC2P3Q9BVR0 1158 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 DUSP21Q9H596 190 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SCN3BQ9NY72 215 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 ERVW-1Q9UQF0 538 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SAMHD1Q9Y3Z3 626 aaKnown RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 HSPE1-MOB4S4R3N1 261 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SOBPA7XYQ1 873 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms