RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CBR4Q8N4T8 237 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SDCCAG3Q96C92 435 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 APIPQ96GX9 242 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 TSSK3Q96PN8 268 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CPPED1Q9BRF8 314 aaPredicted RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 OR2AG1Q9H205 316 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 PRSS16Q9NQE7 514 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 UBAP1Q9NZ09 502 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 COMMD3-BMI1R4GMX3 469 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 E7EQ34 232 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CXCR6O00574 342 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 MMP20O60882 483 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 PRSS23O95084 383 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 KAT7O95251 611 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 HPRP00739 348 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 EPHX1P07099 455 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 NCK1P16333 377 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CKMT2P17540 419 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 KELP23276 732 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 HPCAL1P37235 193 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 OPRD1P41143 372 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 ZNF648Q5T619 568 aaPredicted RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 GALNT18Q6P9A2 607 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SLCO4C1Q6ZQN7 724 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 LAS2Q8IYD9 372 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 OR10A6Q8NH74 314 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 C11orf24Q96F05 449 aaPredicted RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 COX14Q96I36 57 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 RNF145Q96MT1 663 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 SMPD3Q9NY59 655 aaPredicted RBP13.14□□□□□ -0.31
SMG6-203ENST00000536871 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 MYRFQ9Y2G1 1151 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 NEUROG3Q9Y4Z2 214 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 PCDHB14Q9Y5E9 798 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 H0YAE9 185 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 POP7O75817 140 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 H6PDO95479 791 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 GJA4P35212 333 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 P2RY2P41231 377 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 BDKRB1P46663 353 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 NR1H2P55055 460 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 TUBA4AP68366 448 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 MERTKQ12866 999 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 ENPP2Q13822 863 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 SELPLGQ14242 412 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 RAB30Q15771 203 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 VITQ6UXI7 678 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 MMAAQ8IVH4 418 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 OR7G3Q8NG95 312 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 ZNF480Q8WV37 535 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 FAM162AQ96A26 154 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 ELSPBP1Q96BH3 223 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 YTHDF1Q9BYJ9 559 aaKnown RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 FBRSQ9HAH7 460 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 CCDC177Q9NQR7 707 aaPredicted RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 SLC25A37Q9NYZ2 338 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 BTNL2Q9UIR0 455 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
SMG6-203ENST00000536871 MUC22E2RYF6 1773 aaPredicted RBP13.13□□□□□ -0.31
SMG6-203ENST00000536871 SAC3D1A6NKF1 404 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 SOCS2O14508 198 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 TPST1O60507 370 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 KCNJ13O60928 360 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 EPN2O95208 641 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 CCNDBP1O95273 360 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 COX7A2P14406 83 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 HOXB9P17482 250 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 C5AR1P21730 350 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 MYF6P23409 242 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 ACADLP28330 430 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PBLDP30039 288 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 SERPINB1P30740 379 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PIK3CBP42338 1070 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 IL12RB1P42701 662 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 RPS9P46781 194 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms