RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	FGF17	O60258	216 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	TSHB	P01222	138 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	GH1	P01241	217 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	F7	P08709	466 aa	Predicted RBP	4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	CA6	P23280	308 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	SSTR1	P30872	391 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	ATP6V1E1	P36543	226 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	GAS1	P54826	345 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	HERC3	Q15034	1050 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	KBTBD12	Q3ZCT8	623 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	C20orf194	Q5TEA3	1177 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	FAM166A	Q6J272	317 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	TMEM270	Q6UE05	265 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	CREBRF	Q8IUR6	639 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	RFLNB	Q8N5W9	214 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	KLHDC1	Q8N7A1	406 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	KIAA0895	Q8NCT3	520 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	TM9SF4	Q92544	642 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	OR2B2	Q9GZK3	357 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	SRD5A3	Q9H8P0	318 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	RNF121	Q9H920	327 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	IARS2	Q9NSE4	1012 aa	Known RBP	4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	ACAD8	Q9UKU7	415 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	CACNA1I	Q9P0X4	2223 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	SDR42E2	A6NKP2	422 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF197	O14709	1029 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	DDHD2	O94830	711 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC16A8	O95907	504 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	MOCS2	O96007	188 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	C8orf89	P0DMQ9	161 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	IGHV4-31	P0DP07	118 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	LHCGR	P22888	699 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	PIK3R1	P27986	724 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ALDH1B1	P30837	517 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	CEACAM8	P31997	349 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	CTNNB1	P35222	781 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	CETN2	P41208	172 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	NME5	P56597	212 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	GCNT1	Q02742	428 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	IL10RB	Q08334	325 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ARL16	Q0P5N6	197 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ILF3	Q12906	894 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF718	Q3SXZ3	478 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF672	Q499Z4	452 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	XKR3	Q5GH77	459 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	SUSD4	Q5VX71	490 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	KIAA1161	Q6NSJ0	714 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	TTC27	Q6P3X3	843 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	PODNL1	Q6PEZ8	512 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	CCDC83	Q8IWF9	413 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF843	Q8N446	348 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	STPG4	Q8N801	248 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	GDAP1L1	Q96MZ0	367 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	MAP3K3	Q99759	626 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	ACTL8	Q9H568	366 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	PDRG1	Q9NUG6	133 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710	HBS1L	Q9Y450	684 aa	Known RBP	4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710		R4GN57	208 aa		4.92	□□□□□ -1.62
PRKDC-208	ENST00000536710		A0A0U1RQG5	324 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710		A0A1B0GUV1	79 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	C17orf105	B2RV13	164 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	TMEM150C	B9EJG8	249 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	CCL24	O00175	119 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	APOH	P02749	345 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	PRSS1	P07477	247 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	SP9	P0CG40	484 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	UROS	P10746	265 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ALDH4A1	P30038	563 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	SFTPD	P35247	375 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	FRK	P42685	505 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	LBX1	P52954	281 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	AP1B1	Q10567	949 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	TEF	Q10587	303 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	GPR17	Q13304	367 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	C2orf76	Q3KRA6	126 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	FUT10	Q6P4F1	479 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	RBMS3	Q6XE24	437 aa	Known RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ANKRD46	Q86W74	232 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	MEX3D	Q86XN8	651 aa	Known RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ARL10	Q8N8L6	244 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	NAT8L	Q8N9F0	302 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	METTL21A	Q8WXB1	218 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	CENPT	Q96BT3	561 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	CABS1	Q96KC9	395 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ACAT2	Q9BWD1	397 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	MTMR12	Q9C0I1	747 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF350	Q9GZX5	532 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	SDCBP2	Q9H190	292 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	PPAN	Q9NQ55	473 aa	Known RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLCO1C1	Q9NYB5	712 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	TRPC4	Q9UBN4	977 aa		4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.91	□□□□□ -1.62
PRKDC-208	ENST00000536710	P2RY10	O00398	339 aa		4.9	□□□□□ -1.63
PRKDC-208	ENST00000536710	TTI1	O43156	1089 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms