RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DLL1O00548 723 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PLA2G10O15496 165 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 KIAA0513O60268 411 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 DLX3O60479 287 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 RHOBTB1O94844 696 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 WDR47O94967 919 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SNX4O95219 450 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 TNNC2P02585 160 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 APOC1P02654 83 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CYP11A1P05108 521 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 S100A6P06703 90 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 ADRA2AP08913 450 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CNPP09543 421 aaKnown RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 RRASP10301 218 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 NR2C1P13056 603 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CXCL3P19876 107 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 RAB3AP20336 220 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 ACVR2AP27037 513 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 AIF1P55008 147 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 VSX2P58304 361 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 MTPNP58546 118 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 KIAA1024LP59773 190 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CSTF1Q05048 431 aaKnown RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 STX5Q13190 355 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CBX2Q14781 532 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 FCN2Q15485 313 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 GPR19Q15760 415 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 FBXO43Q4G163 708 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 HYIQ5T013 277 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 NBPF12Q5TAG4 269 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 PYHIN1Q6K0P9 492 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 DNAJC24Q6P3W2 148 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SCYL2Q6P3W7 929 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 DRICH1Q6PGQ1 229 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 SCARA5Q6ZMJ2 495 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CCDC149Q6ZUS6 474 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 C1orf186Q6ZWK4 172 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 GALNT10Q86SR1 603 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CYP4Z1Q86W10 505 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 HIPK1Q86Z02 1210 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MS4A15Q8N5U1 240 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CHST14Q8NCH0 376 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZNF555Q8NEP9 628 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 BEST4Q8NFU0 473 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 RDM1Q8NG50 284 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 OR8D4Q8NGM9 314 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 COQ8AQ8NI60 647 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 EXT2Q93063 718 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 UPRTQ96BW1 309 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 TBC1D20Q96BZ9 403 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MTFMTQ96DP5 389 aaKnown RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 CMTM3Q96MX0 182 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZNF578Q96N58 590 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZNF285Q96NJ3 590 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SLC30A2Q9BRI3 323 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CNPPD1Q9BV87 410 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CINPQ9BW66 212 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 BARHL1Q9BZE3 327 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PRDM6Q9NQX0 595 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SNTG1Q9NSN8 517 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZFP57Q9NU63 452 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 DNAJC11Q9NVH1 559 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 INTS10Q9NVR2 710 aaKnown RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 OXSMQ9NWU1 459 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SDHAF2Q9NX18 166 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MLXQ9UH92 298 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 RAB23Q9ULC3 237 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 BTRCQ9Y297 605 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MAP4K5Q9Y4K4 846 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PCDHA11Q9Y5I1 949 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 LYVE1Q9Y5Y7 322 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PTPRJQ12913 1337 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 A0A1B0GVC2 190 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MTMR11A4FU01 709 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 A6NIN4 97 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MSH4O15457 936 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PIP5K1CO60331 668 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 PAPSS2O95340 614 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 RLN2P04090 185 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 HMGN1P05114 100 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 LPLP06858 475 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SYN1P17600 705 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 FPR3P25089 353 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 HLA-FP30511 346 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 MAN2A2P49641 1150 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CDH6P55285 790 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 BCAR1P56945 870 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 OLR1P78380 273 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 NRG1Q02297 640 aaPredicted RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZNF45Q02386 682 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 GRK1Q15835 563 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SNRNP35Q16560 246 aaKnown RBP3.62□□□□□ -1.83
MCF2-210ENST00000536274 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.62□□□□□ -1.83
MCF2-210ENST00000536274 MPP7Q5T2T1 576 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SFRP5Q5T4F7 317 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 TSTD2Q5T7W7 516 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 CDPF1Q6NVV7 123 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 FAM131AQ6UXB0 335 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 TFAP2EQ6VUC0 442 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 HDDC2Q7Z4H3 204 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms