RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZNF354AO60765 605 aaPredicted RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 CAPN3P20807 821 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 ZBTB25P24278 435 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 PTGER4P35408 488 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 DNA2P51530 1060 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 GARNL3Q5VVW2 1013 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 C1orf131Q8NDD1 294 aaKnown RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 THOC1Q96FV9 657 aaKnown RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 SERINC2Q96SA4 455 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 ADNPQ9H2P0 1102 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 TLE6Q9H808 572 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 MTHFD2LQ9H903 347 aaPredicted RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 EIF2B3Q9NR50 452 aaKnown RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 POMT2Q9UKY4 750 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 PA2G4Q9UQ80 394 aaKnown RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 VSIG4Q9Y279 399 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 KIF25-AS1Q9Y6Z4 181 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 COL16A1Q07092 1604 aaPredicted RBP3.41□□□□□ -1.86
VBP1-203ENST00000535916 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 OR2A25A4D2G3 310 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 PGPEP1LA6NFU8 196 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 B4DLN1 442 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 PTGES3LE9PB15 166 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 K7EQD1 137 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 ARPC2O15144 300 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 TOMM70O94826 608 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 BCL10O95999 233 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 OR3A2P47893 321 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 MRPL12P52815 198 aaKnown RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 ZNF177Q13360 481 aaPredicted RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 FHL5Q5TD97 284 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 LGI2Q8N0V4 545 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 THAP8Q8NA92 274 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 EXD1Q8NHP7 514 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 SYN2Q92777 582 aaPredicted RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 ERP27Q96DN0 273 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 MMP27Q9H306 513 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 DPP3Q9NY33 737 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 LNPEPQ9UIQ6 1025 aa3.4□□□□□ -1.87
VBP1-203ENST00000535916 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 WBP11Q9Y2W2 641 aaKnown RBP3.4□□□□□ -1.87
VBP1-203ENST00000535916 CCER2I3L3R5 266 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 MBD4O95243 580 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 LMAN1P49257 510 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 NDPQ00604 133 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 MYL7Q01449 175 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 DHODHQ02127 395 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 PTPN14Q15678 1187 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 RAB41Q5JT25 222 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 SPECC1Q5M775 1068 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 KRT79Q5XKE5 535 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 TMEM211Q6ICI0 200 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 FAM180BQ6P0A1 224 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 OR4N5Q8IXE1 308 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 OR7A2PQ8NGA2 310 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 SPDL1Q96EA4 605 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 CALML4Q96GE6 196 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 ATF6BQ99941 703 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 MTMR12Q9C0I1 747 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 NYAP2Q9P242 653 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 GON4LQ3T8J9 2241 aa3.39□□□□□ -1.87
VBP1-203ENST00000535916 TRBV5-5A0A0J9YX44 114 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 A6NCN8 305 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 CTDSP2O14595 271 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 KRT33AO76009 404 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 GP1BBP13224 206 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 TRIM21P19474 475 aaKnown RBP3.38□□□□□ -1.87
VBP1-203ENST00000535916 ITGA7Q13683 1181 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 PHKG1Q16816 387 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 FAM198BQ6UWH4 519 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 BAIAP2L2Q6UXY1 529 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 CD177Q8N6Q3 437 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
VBP1-203ENST00000535916 GPATCH11Q8N954 259 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 RHOXF1Q8NHV9 184 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 SFXN2Q96NB2 322 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 OPA3Q9H6K4 179 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 EQTNQ9NQ60 294 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 BLOC1S4Q9NUP1 217 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 PSD3Q9NYI0 1048 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.38□□□□□ -1.87
VBP1-203ENST00000535916 SUCLA2Q9P2R7 463 aaPredicted RBP3.38□□□□□ -1.87
VBP1-203ENST00000535916 PADI2Q9Y2J8 665 aa3.38□□□□□ -1.87
VBP1-203ENST00000535916 COL4A4P53420 1690 aaPredicted RBP3.38□□□□□ -1.87
VBP1-203ENST00000535916 K7ENM7 598 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 O00370 1275 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 PTP4A3O75365 173 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 BAIAP3O94812 1187 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 SLCO2B1O94956 709 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 NXPH4O95158 308 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 DNASE1P24855 282 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 MPZP25189 248 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 KHKP50053 298 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 KLC1Q07866 573 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 CAPRIN1Q14444 709 aaKnown RBP3.37□□□□□ -1.87
VBP1-203ENST00000535916 TOMM20Q15388 145 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms