RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DDX39BQ13838 428 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 SF1Q15637 639 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ADNP2Q6IQ32 1131 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 TMEM214Q6NUQ4 689 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ENPP6Q6UWR7 440 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 CLVS1Q8IUQ0 354 aaPredicted RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ISOC1Q96CN7 298 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 HHIPQ96QV1 700 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 SH3GL1Q99961 368 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 LIN28AQ9H9Z2 209 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 DEC1Q9P2X7 70 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ADGRE2Q9UHX3 823 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 PCDHGA11Q9Y5H2 935 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 HEPACAM2A8MVW5 462 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 LILRB5O75023 590 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 ALBP02768 609 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 HPCAP84074 193 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 CHRNB3Q05901 458 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 NKG7Q16617 165 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 OTUD3Q5T2D3 398 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-202ENST00000535906 TMIEQ8NEW7 156 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 FBXO30Q8TB52 745 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 ATL1Q8WXF7 558 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 MAGEB10Q96LZ2 347 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-202ENST00000535906 FAM129BQ96TA1 746 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 CPPED1Q9BRF8 314 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-202ENST00000535906 UGT2B28Q9BY64 529 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 OR2AG1Q9H205 316 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 SOX17Q9H6I2 414 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-202ENST00000535906 ZDHHC4Q9NPG8 344 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
VPS33B-202ENST00000535906 A0A096LPI6 279 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 H3BM21 787 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 MMP20O60882 483 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 NFATC1O95644 943 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 C6P13671 934 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 TTKP33981 857 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 GZMMP51124 257 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CSTF3Q12996 717 aaKnown RBP12.94□□□□□ -0.34
VPS33B-202ENST00000535906 GPM6BQ13491 265 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 DAG1Q14118 895 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF234Q14588 700 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 OR4F3Q6IEY1 312 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 GPR180Q86V85 440 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CFAP206Q8IYR0 622 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 OR56A3Q8NH54 315 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CSGALNACT1Q8TDX6 532 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 OR8D1Q8WZ84 308 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 FGF13Q92913 245 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 TMBIM1Q969X1 311 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 NUS1Q96E22 293 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ITCHQ96J02 903 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 FCRL1Q96LA6 429 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 RMND5AQ9H871 391 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CERS4Q9HA82 394 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 SPATA6Q9NWH7 488 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-202ENST00000535906 LIMD1Q9UGP4 676 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 UTS2RQ9UKP6 389 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CXCR6O00574 342 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ETHE1O95571 254 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 C1QCP02747 245 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ALPLP05186 524 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ADRB3P13945 408 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ACPPP15309 386 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 LBX1P52954 281 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ELAVL3Q14576 367 aaKnown RBP12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CCNYL2Q5T2Q4 361 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 ATG9BQ674R7 924 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 RAET1GQ6H3X3 334 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 XKR5Q6UX68 686 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 CALHM3Q86XJ0 350 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 TRAPPC5Q8IUR0 188 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 MICU2Q8IYU8 434 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 OR7A2PQ8NGA2 310 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 DNAJB8Q8NHS0 232 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 FOPNLQ96NB1 174 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 EPHX3Q9H6B9 360 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 EBF1Q9UH73 591 aa12.94□□□□□ -0.34
VPS33B-202ENST00000535906 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-202ENST00000535906 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-202ENST00000535906 MAGEB17A8MXT2 336 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 H0YIV9 168 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 SH3BGRLO75368 114 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 C1orf105O95561 183 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 MTHFRP42898 656 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 GPR1P46091 355 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 HLCSP50747 726 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 NUP107P57740 925 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 CTBSQ01459 385 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 SLC14A1Q13336 389 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 DCTN2Q13561 401 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 PLCL1Q15111 1095 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 UGT8Q16880 541 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms