RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 UBE2E3Q969T4 207 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SH3KBP1Q96B97 665 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 CXorf40BQ96DE9 158 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 RMDN2Q96LZ7 410 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 FERD3LQ96RJ6 166 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 EDEM2Q9BV94 578 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TCEAL2Q9H3H9 227 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 MEAF6Q9HAF1 191 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 KCNK13Q9HB14 408 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 IL21RQ9HBE5 538 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 ZBTB26Q9HCK0 441 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 PARD6AQ9NPB6 346 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TMEM9BQ9NQ34 198 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 HEY2Q9UBP5 337 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC22A14Q9Y267 594 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 FIS1Q9Y3D6 152 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 PCYT1BQ9Y5K3 369 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TMEM131Q92545 1883 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 KIR2DS5A0A0G2JLQ3 304 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 A0A0G2JNG1 304 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 PRR19A6NJB7 356 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 KIR2DS3K7RE56 304 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 UBFD1O14562 309 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC22A2O15244 555 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ULK1O75385 1050 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ANXA6P08133 673 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 TSPAN8P19075 237 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SERPINB3P29508 390 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ADSLP30566 484 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 HNF4AP41235 474 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 TBPL1P62380 186 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 IRF8Q02556 426 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SF3A3Q12874 501 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 BNIP3Q12983 259 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 C1orf61Q13536 156 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 NAE1Q13564 534 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 LAPTM5Q13571 262 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 KIR2DS5Q14953 304 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SHBQ15464 509 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 HIST2H2ACQ16777 129 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 FBXO48Q5FWF7 155 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 HIST2H2AA3Q6FI13 130 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC30A9Q6PML9 568 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 MBOAT1Q6ZNC8 495 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 MTDHQ86UE4 582 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 THOC6Q86W42 341 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC25A45Q8N413 288 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 CDYL2Q8N8U2 506 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 OR5AR1Q8NGP9 310 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 OR2I1PQ8NGU4 316 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ZNF480Q8WV37 535 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SMPDL3AQ92484 453 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ESAMQ96AP7 390 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC22A18Q96BI1 424 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ERP27Q96DN0 273 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 DUSP23Q9BVJ7 150 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ATG10Q9H0Y0 220 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 EHD1Q9H4M9 534 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ELOVL6Q9H5J4 265 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 POT1Q9NUX5 634 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 PCDHGB2Q9Y5G2 931 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 DNAJC15Q9Y5T4 150 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 ANKRD12Q6UB98 2062 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 LRP4O75096 1905 aa10.57□□□□□ -0.72
CCDC90B-218ENST00000533761 LRRC14BA6NHZ5 514 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CDX4O14627 284 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 YY2O15391 372 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 RGS14O43566 566 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 SKAP2O75563 359 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CCNDBP1O95273 360 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CAPN1P07384 714 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 ALPPL2P10696 532 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CXCR2P25025 360 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 AK4P27144 223 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 SHMT2P34897 504 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 GDF5P43026 501 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CCR10P46092 362 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 MNAT1P51948 309 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 PHEXP78562 749 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 TRAF3Q13114 568 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 NAA25Q14CX7 972 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 TCEA2Q15560 299 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CYP2A13Q16696 494 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 INAVAQ3KP66 663 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CLEC6AQ6EIG7 209 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 RPS27LQ71UM5 84 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 SYVN1Q86TM6 617 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 GATAD2AQ86YP4 633 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 FAM46DQ8NEK8 389 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 OR4F6Q8NGB9 312 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 OR52B6Q8NGF0 335 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 PYCR2Q96C36 320 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 MOCOSQ96EN8 888 aa10.56□□□□□ -0.72
CCDC90B-218ENST00000533761 MAELQ96JY0 434 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms