RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SAR1BQ9Y6B6 198 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ASH1LQ9NR48 2969 aaKnown RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 OR2A25A4D2G3 310 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 E7ENX8 843 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 FFAR3O14843 346 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 GPR42O15529 346 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 TTI1O43156 1089 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 DPM1O60762 260 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CEACAM4O75871 244 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MED26O95402 600 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 TTC4O95801 387 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 IGHEP01854 428 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 STATHP02808 62 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ERGP11308 486 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 FBLP22087 321 aaKnown RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ITGA3P26006 1051 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ELK3P41970 407 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 RGS4P49798 205 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ITGA8P53708 1063 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MRPS25P82663 173 aaKnown RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 TAP2Q03519 686 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PRDX1Q06830 199 aaKnown RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MORF4L2Q15014 288 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 RBBP7Q16576 425 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 NKG7Q16617 165 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MUM1Q2TAK8 710 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 UGT3A1Q6NUS8 523 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 FBXO42Q6P3S6 717 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CYHR1Q6ZMK1 362 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 SYDE1Q6ZW31 735 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PAQR7Q86WK9 346 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CREG2Q8IUH2 290 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PLD3Q8IV08 490 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MYO1HQ8N1T3 1032 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 GALNT16Q8N428 558 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CSNK1A1LQ8N752 337 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 GPATCH11Q8N954 259 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 EEF1AKMT1Q8WVE0 214 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 SLCO2A1Q92959 643 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 RERGQ96A58 199 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CERS2Q96G23 380 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF285Q96NJ3 590 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 RUNDC3BQ96NL0 473 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PLCD4Q9BRC7 762 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 NAT9Q9BTE0 207 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF304Q9HCX3 659 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 MLXIPLQ9NP71 852 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
CAPN1-225ENST00000533704 TAS2R13Q9NYV9 303 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 FBXL4Q9UKA2 621 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 BSNQ9UPA5 3926 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 LRRK2Q5S007 2527 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 SVILO95425 2214 aa9.97□□□□□ -0.81
CAPN1-225ENST00000533704 PRRC2CQ9Y520 2896 aaKnown RBP9.96□□□□□ -0.81
CAPN1-225ENST00000533704 IGKV1-8A0A0C4DH67 115 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 FITM1A5D6W6 292 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PABPN1LA6NDY0 278 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 GFYI3L273 518 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 AGPSO00116 658 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 HAT1O14929 419 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ALBP02768 609 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 SAT1P21673 171 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 IVDP26440 423 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 GABRB3P28472 473 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 IMPA1P29218 277 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PGGT1BP53609 377 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 CDKN2DP55273 166 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ARL4CP56559 192 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 OCA2Q04671 838 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PDAP1Q13442 181 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 HIF1AQ16665 826 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 HKDC1Q2TB90 917 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 VWA5B1Q5TIE3 1220 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 IRAK1BP1Q5VVH5 260 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PRAMEF13Q5VWM6 474 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PAPD7Q5XG87 772 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 TRMT10BQ6PF06 316 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PAQR3Q6TCH7 311 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 MBOAT1Q6ZNC8 495 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 FBXO15Q8NCQ5 510 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 CPT1CQ8TCG5 803 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 MCOLN3Q8TDD5 553 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 MIB2Q96AX9 1013 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 SNF8Q96H20 258 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 KRT12Q99456 494 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 SPSB2Q99619 263 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 CRB3Q9BUF7 120 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ATG10Q9H0Y0 220 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 WDR54Q9H977 334 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 SLAMF7Q9NQ25 335 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 CCDC177Q9NQR7 707 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ANKMY1Q9P2S6 941 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 ADAMTS6Q9UKP5 1117 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms