RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 SERTAD3Q9UJW9 196 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 CDYLQ9Y232 598 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 SLC5A6Q9Y289 635 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 B3GNT3Q9Y2A9 372 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 NFS1Q9Y697 457 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 TACC2O95359 2948 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ANKUB1A6NFN9 424 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 C2orf74A8MZ97 194 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ISM1B1AKI9 464 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 C9J4A7 227 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 BTN3A3O00478 584 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 BTN3A1O00481 513 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 MAP3K7O43318 606 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 KLF7O75840 302 aaPredicted RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 HBQ1P09105 142 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ST6GAL1P15907 406 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 GABRB3P28472 473 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 PRDX3P30048 256 aaKnown RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 OTX2P32243 289 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 SHMT2P34897 504 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 CLCN7P51798 805 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 SLC12A2P55011 1212 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 KYNUQ16719 465 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 GLE1Q53GS7 698 aaKnown RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 TEX35Q5T0J7 233 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 HECTD2Q5U5R9 776 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 UNC5DQ6UXZ4 953 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 MRGPREQ86SM8 312 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 RAB43Q86YS6 212 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 TICAM1Q8IUC6 712 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 DCUN1D3Q8IWE4 304 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 CNTN4Q8IWV2 1026 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 CPNE9Q8IYJ1 553 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 CISD2Q8N5K1 135 aaKnown RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 LMNTD1Q8N9Z9 388 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 MAGEC3Q8TD91 643 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 KCNJ9Q92806 393 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 MRRFQ96E11 262 aaKnown RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 C5orf34Q96MH7 638 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 IP6K3Q96PC2 410 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 IL17FQ96PD4 163 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 SLC30A3Q99726 388 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 DHRS4Q9BTZ2 278 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 SLC7A5P2Q9GIP4 190 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 TFB2MQ9H5Q4 396 aaKnown RBP8.37□□□□□ -1.07
COPB1-210ENST00000533533 PLAC1Q9HBJ0 212 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ABCF3Q9NUQ8 709 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 NSMCE4AQ9NXX6 385 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 TAS2R13Q9NYV9 303 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ACTR10Q9NZ32 417 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ICKQ9UPZ9 632 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 PADI2Q9Y2J8 665 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 DHRS7Q9Y394 339 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 CROCCQ5TZA2 2017 aa8.37□□□□□ -1.07
COPB1-210ENST00000533533 ITPR3Q14573 2671 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 TCRBV9S1A1TA0A576 114 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 KRT87PA6NCN2 255 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 PABPN1LA6NDY0 278 aaKnown RBP8.36□□□□□ -1.07
COPB1-210ENST00000533533 E7EQ34 232 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 ZNF749O43361 778 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 KLHL41O60662 606 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 C1orf105O95561 183 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CATP04040 527 aaKnown RBP8.36□□□□□ -1.07
COPB1-210ENST00000533533 ALPPP05187 535 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CHRM5P08912 532 aaPredicted RBP8.36□□□□□ -1.07
COPB1-210ENST00000533533 NUDT7P0C024 238 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 AGXTP21549 392 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CCNFP41002 786 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 RGS4P49798 205 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 PGGT1BP53609 377 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CDKN2DP55273 166 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 SSPNQ14714 243 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 MYBPC3Q14896 1274 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 UAP1Q16222 522 aaPredicted RBP8.36□□□□□ -1.07
COPB1-210ENST00000533533 CCSMST1Q4G0I0 132 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 DCAF10Q5QP82 559 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 FAM45BPQ6NSW5 357 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 PAQR3Q6TCH7 311 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CDHR3Q6ZTQ4 885 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 PIWIL4Q7Z3Z4 852 aaKnown RBP8.36□□□□□ -1.07
COPB1-210ENST00000533533 TRIM73Q86UV7 250 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 IFT20Q8IY31 132 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 MYO1HQ8N1T3 1032 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CLEC1AQ8NC01 280 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 FBF1Q8TES7 1133 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 RAD51AP1Q96B01 352 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 LINGO1Q96FE5 620 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 FER1L6-AS2Q96M78 137 aa8.36□□□□□ -1.07
COPB1-210ENST00000533533 TRAPPC9Q96Q05 1148 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms