RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ARHGAP22Q7Z5H3 698 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
NXF1-216ENST00000533499 SLC22A9Q8IVM8 553 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 PITPNM3Q9BZ71 974 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 ZNF768Q9H5H4 540 aaKnown RBP16.79■□□□□ 0.28
NXF1-216ENST00000533499 OCIAD1Q9NX40 245 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 PDP2Q9P2J9 529 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 PISDQ9UG56 409 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 SNX7Q9UNH6 387 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 ACTL7BQ9Y614 415 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 PTPRBP23467 1997 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 CCDC187A0A096LP49 1063 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 A0A0J9YVX5 310 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 TMEM120BA0PK00 339 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 WDR91A4D1P6 747 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 TARM1B6A8C7 271 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 G3V2L1 256 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 STX16-NPEPL1H3BU86 382 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 STX16O14662 325 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 KLK8O60259 260 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 NRP2O60462 931 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 SUPT7LO94864 414 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 FKBP9O95302 570 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 ANKRD34CP0C6C1 535 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 NEFHP12036 1026 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 EPB42P16452 691 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 CCR8P51685 355 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 MEF2AQ02078 507 aaPredicted RBP16.78■□□□□ 0.28
NXF1-216ENST00000533499 GTF2H2Q13888 395 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 ZIC1Q15915 447 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 HSP90B2PQ58FF3 399 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 HHATQ5VTY9 493 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 FCRL6Q6DN72 434 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 RPS27LQ71UM5 84 aaKnown RBP16.78■□□□□ 0.28
NXF1-216ENST00000533499 PLD3Q8IV08 490 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 RDH11Q8TC12 318 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 UBTD2Q8WUN7 234 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 KLHL6Q8WZ60 621 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 NEIL2Q969S2 332 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 CCDC126Q96EE4 140 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 RNF31Q96EP0 1072 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 TCTN2Q96GX1 697 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 SSU72Q9NP77 194 aaKnown RBP16.78■□□□□ 0.28
NXF1-216ENST00000533499 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
NXF1-216ENST00000533499 NKIRAS1Q9NYS0 192 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 COPG2Q9UBF2 871 aa16.78■□□□□ 0.28
NXF1-216ENST00000533499 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 E7EQ34 232 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 HGSO14964 777 aaPredicted RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 H2AFYO75367 372 aaKnown RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 CCL4P13236 92 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 NELFEP18615 380 aaKnown RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 TSPAN8P19075 237 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 GNAZP19086 355 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 VARSP26640 1264 aaKnown RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 GRK3P35626 688 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 IRF8Q02556 426 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 CYP4F3Q08477 520 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 NAA25Q14CX7 972 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 PCBP2Q15366 365 aaKnown RBP eCLIP16.77■□□□□ 0.28
NXF1-216ENST00000533499 GPR19Q15760 415 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 XKR6Q5GH73 641 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 CFAP157Q5JU67 520 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 GOLGA7Q7Z5G4 137 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 KMT5CQ86Y97 462 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 CARFQ8N187 725 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 WDR36Q8NI36 951 aaKnown RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 PPP1R14CQ8TAE6 165 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 SREK1Q8WXA9 508 aaKnown RBP16.77■□□□□ 0.28
NXF1-216ENST00000533499 ZUFSPQ96AP4 578 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 MOCOSQ96EN8 888 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 SLC41A2Q96JW4 573 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 OR6C1Q96RD1 312 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 CTRCQ99895 268 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 MECRQ9BV79 373 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 FAM60AQ9NP50 221 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 TMEM184CQ9NVA4 438 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 KLK13Q9UKR3 277 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 SATB2Q9UPW6 733 aa16.77■□□□□ 0.28
NXF1-216ENST00000533499 COL27A1Q8IZC6 1860 aaPredicted RBP16.77■□□□□ 0.27
NXF1-216ENST00000533499 HEATR5BQ9P2D3 2071 aa16.77■□□□□ 0.27
NXF1-216ENST00000533499 PMS2P1A4D2B8 440 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 TM9SF1O15321 606 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 PRPF4O43172 522 aaKnown RBP eCLIP16.76■□□□□ 0.27
NXF1-216ENST00000533499 KATNA1O75449 491 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 ZWINTO95229 277 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 EIF2S1P05198 315 aaKnown RBP16.76■□□□□ 0.27
NXF1-216ENST00000533499 FOLR1P15328 257 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 ITIH1P19827 911 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 PRKAA2P54646 552 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 CDH13P55290 713 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 HERVK_113P63132 956 aa16.76■□□□□ 0.27
NXF1-216ENST00000533499 CHIT1Q13231 466 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms