RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CDKL1Q00532 357 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 NAE1Q13564 534 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 FRMPD2BQ6IN97 320 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 FAM198BQ6UWH4 519 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ADAMTSL2Q86TH1 951 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 PROKR1Q8TCW9 393 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 UBXN10Q96LJ8 280 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 GBP5Q96PP8 586 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ATG10Q9H0Y0 220 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CUEDC1Q9NWM3 386 aaPredicted RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 NFU1Q9UMS0 254 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 SNX7Q9UNH6 387 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 OARD1Q9Y530 152 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 NKX2-8O15522 239 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 ITGB2P05107 769 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 RAB40ALP0C0E4 278 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 CSRP3P50461 194 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 MC1RQ01726 317 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 TSNQ15631 228 aaKnown RBP19.58■□□□□ 0.72
CCS-208ENST00000533244 PTCHD3Q3KNS1 767 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 THEMIS2Q5TEJ8 643 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 LCTLQ6UWM7 567 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 ATL1Q8WXF7 558 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 WBP1Q96G27 269 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 BBC3Q96PG8 261 aaPredicted RBP19.58■□□□□ 0.72
CCS-208ENST00000533244 SLC7A5P2Q9GIP4 190 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 SYNPO2LQ9H987 977 aa19.58■□□□□ 0.72
CCS-208ENST00000533244 LOC105369274A0A096LPK9 316 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 LOC102723532A0A0G2JNH3 316 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 A0A0J9YVX5 310 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 HMX2A2RU54 273 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 PABPN1LA6NDY0 278 aaKnown RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 RHOXF2BP0C7M4 288 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 EZRP15311 586 aaKnown RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 HRH2P25021 359 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 PTPN4P29074 926 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 CDC20Q12834 499 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 GRM7Q14831 915 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 YOD1Q5VVQ6 348 aaPredicted RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 CAPN13Q6MZZ7 669 aaPredicted RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 OR4N4Q8N0Y3 316 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 LSM14AQ8ND56 463 aaKnown RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 MED8Q96G25 268 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 OR2A5Q96R48 311 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 RHOXF2Q9BQY4 288 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 NDC1Q9BTX1 674 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 NLNQ9BYT8 704 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 ACTL8Q9H568 366 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 ABCF3Q9NUQ8 709 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 UTP6Q9NYH9 597 aaKnown RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 DHCR7Q9UBM7 475 aaKnown RBP19.57■□□□□ 0.72
CCS-208ENST00000533244 CTNNAL1Q9UBT7 734 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 SH2B3Q9UQQ2 575 aa19.57■□□□□ 0.72
CCS-208ENST00000533244 ATXN7O15265 892 aaPredicted RBP19.56■□□□□ 0.72
CCS-208ENST00000533244 ZNF500O60304 480 aaPredicted RBP19.56■□□□□ 0.72
CCS-208ENST00000533244 CREG1O75629 220 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 ACSL3O95573 720 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 GUCA1CO95843 209 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 SLC35E2BP0CK96 405 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 CCDC166P0CW27 439 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 CD1DP15813 335 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 NPPBP16860 134 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 ARSFP54793 590 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 VSX2P58304 361 aaPredicted RBP19.56■□□□□ 0.72
CCS-208ENST00000533244 ATP6V0D1P61421 351 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 SLMAPQ14BN4 828 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 PRTGQ2VWP7 1150 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 CMC1Q7Z7K0 106 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 OR4K3Q96R72 315 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 TMEM184CQ9NVA4 438 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 IRAK4Q9NWZ3 460 aa19.56■□□□□ 0.72
CCS-208ENST00000533244 FARSAQ9Y285 508 aaKnown RBP19.56■□□□□ 0.72
CCS-208ENST00000533244 MDC1Q14676 2089 aaKnown RBP19.56■□□□□ 0.72
CCS-208ENST00000533244 SMG1Q96Q15 3661 aaKnown RBP19.55■□□□□ 0.72
CCS-208ENST00000533244 H0YGG7 62 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 HAT1O14929 419 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 KATNA1O75449 491 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 ONECUT2O95948 504 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 ITGAXP20702 1163 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 CRABP2P29373 138 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 ARF3P61204 181 aaPredicted RBP19.55■□□□□ 0.72
CCS-208ENST00000533244 RPS15P62841 145 aaKnown RBP19.55■□□□□ 0.72
CCS-208ENST00000533244 SOWAHCQ53LP3 525 aaPredicted RBP19.55■□□□□ 0.72
CCS-208ENST00000533244 WASHC2DQ5SRD0 308 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 C17orf64Q86WR6 236 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 KLHDC8AQ8IYD2 350 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 SPATA6LQ8N4H0 392 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 SLC44A1Q8WWI5 657 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 PYCR2Q96C36 320 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 CATSPER2Q96P56 530 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 HAUS8Q9BT25 410 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 STARD5Q9NSY2 213 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 CUTCQ9NTM9 273 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 TXLNGQ9NUQ3 528 aa19.55■□□□□ 0.72
CCS-208ENST00000533244 A0A1B0GX78 115 aa19.54■□□□□ 0.72
CCS-208ENST00000533244 H7BY64 318 aa19.54■□□□□ 0.72
CCS-208ENST00000533244 DSCR3O14972 297 aa19.54■□□□□ 0.72
CCS-208ENST00000533244 ANXA5P08758 320 aa19.54■□□□□ 0.72
CCS-208ENST00000533244 AGXTP21549 392 aa19.54■□□□□ 0.72
CCS-208ENST00000533244 SLC26A3P40879 764 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms