RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ATP6V0D1P61421 351 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 DLG1Q12959 904 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 BMPR2Q13873 1038 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 CSHL1Q14406 222 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 UAP1Q16222 522 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 PRAMEF13Q5VWM6 474 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 FRMPD2BQ6IN97 320 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 CAPN13Q6MZZ7 669 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 RNF44Q7L0R7 432 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 ADAMTSL2Q86TH1 951 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 OR4N4Q8N0Y3 316 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF655Q8N720 491 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 UHMK1Q8TAS1 419 aaKnown RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 KIAA1143Q96AT1 154 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 MED8Q96G25 268 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 SLC45A3Q96JT2 553 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 PRAP1Q96NZ9 151 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 SELENOSQ9BQE4 189 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 EFHD1Q9BUP0 239 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 TMEM184CQ9NVA4 438 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 CUEDC1Q9NWM3 386 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 PCDHGA4Q9Y5G9 962 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 HEATR5BQ9P2D3 2071 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 LOC400499M0QZD8 3231 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 PABPN1LA6NDY0 278 aaKnown RBP19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ZSCAN9O15535 394 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-209ENST00000532725 RIPK2O43353 540 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ABHD2P08910 425 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 HRH2P25021 359 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 DLSTP36957 453 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 SLC26A3P40879 764 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 KCNC1P48547 511 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 TCTE1Q5JU00 501 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 WASHC2DQ5SRD0 308 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF385CQ66K41 422 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-209ENST00000532725 RHBDD2Q6NTF9 364 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 LCTLQ6UWM7 567 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 RAPH1Q70E73 1250 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 CT55Q8WUE5 264 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 MR1Q95460 341 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 KIAA1191Q96A73 305 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ALKBH8Q96BT7 664 aaKnown RBP19.02■□□□□ 0.64
CPSF1-209ENST00000532725 PTERQ96BW5 349 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 PYCR2Q96C36 320 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 OR2A5Q96R48 311 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 OR4K3Q96R72 315 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 PAFAH2Q99487 392 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ZFYVE21Q9BQ24 234 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ANKZF1Q9H8Y5 726 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 SYNPO2LQ9H987 977 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 STARD5Q9NSY2 213 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 SH2B3Q9UQQ2 575 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 ACOT9Q9Y305 439 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 PCDHGA6Q9Y5G7 932 aa19.02■□□□□ 0.64
CPSF1-209ENST00000532725 FITM1A5D6W6 292 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 C21orf140B9A014 251 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 C2P06681 752 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 ANXA5P08758 320 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 TNFRSF8P28908 595 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 MSH2P43246 934 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 VSX2P58304 361 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-209ENST00000532725 TGFBIQ15582 683 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 OR4D1Q15615 310 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 ISCA2Q86U28 154 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 GSPT2Q8IYD1 628 aaKnown RBP19.01■□□□□ 0.63
CPSF1-209ENST00000532725 ZSCAN1Q8NBB4 408 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 DCAKDQ8WVC6 231 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 RHBDF1Q96CC6 855 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 GPR87Q9BY21 358 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 SLC7A5P2Q9GIP4 190 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 CHST8Q9H2A9 424 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 EPB41L4BQ9H329 900 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 SNX15Q9NRS6 342 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 IGSF5Q9NSI5 407 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 ZNF180Q9UJW8 692 aa19.01■□□□□ 0.63
CPSF1-209ENST00000532725 POC1B-GALNT4F8VUJ3 575 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 H0YGG7 62 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 NKX2-8O15522 239 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 ALDOAP04075 364 aaKnown RBP19■□□□□ 0.63
CPSF1-209ENST00000532725 CAPN1P07384 714 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 INHBAP08476 426 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 LTA4HP09960 611 aaKnown RBP19■□□□□ 0.63
CPSF1-209ENST00000532725 HNMTP50135 292 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 SERPINB9P50453 376 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 ARF3P61204 181 aaPredicted RBP19■□□□□ 0.63
CPSF1-209ENST00000532725 CSNK1G2P78368 415 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 DNASE1L3Q13609 305 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 GRM7Q14831 915 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 PTCHD3Q3KNS1 767 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 CDKL4Q5MAI5 379 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 CCDC91Q7Z6B0 441 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 C17orf64Q86WR6 236 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 GPSM1Q86YR5 675 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 NXNL1Q96CM4 212 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 GBP5Q96PP8 586 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 RUFY1Q96T51 708 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 DPH2Q9BQC3 489 aaPredicted RBP19■□□□□ 0.63
CPSF1-209ENST00000532725 HAUS8Q9BT25 410 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 NDC1Q9BTX1 674 aa19■□□□□ 0.63
CPSF1-209ENST00000532725 DHRS4Q9BTZ2 278 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms