RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 IL1RAPL1Q9NZN1 696 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 BFARQ9NZS9 450 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 SAR1BQ9Y6B6 198 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 CCDC88CQ9P219 2028 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 CSMD2Q7Z408 3487 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 APCP25054 2843 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 TCP11X1B4DZS4 312 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 MKRN2OSH3BPM6 223 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 CD3EAPO15446 510 aaKnown RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 KCNJ13O60928 360 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 KATNA1O75449 491 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 VAPBO95292 243 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 GAS8O95995 478 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 PRF1P14222 555 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 TCP1P17987 556 aaKnown RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 STAT5AP42229 794 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 MAGEA6P43360 314 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ARCN1P48444 511 aaKnown RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 PRLHRP49683 370 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 GFERP55789 205 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 PPP1CAP62136 330 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 MC2RQ01718 297 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 BCL7AQ4VC05 210 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ARHGAP22Q7Z5H3 698 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 KLHL7Q8IXQ5 586 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 NAT8LQ8N9F0 302 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 MYRIPQ8NFW9 859 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 RSC1A1Q92681 617 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ULK4Q96C45 1275 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 CXorf40BQ96DE9 158 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 AHCYL2Q96HN2 611 aaKnown RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ELMO2Q96JJ3 720 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF514Q96K75 400 aaPredicted RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 SIGLEC10Q96LC7 697 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 C12orf66Q96MD2 445 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 NAP1L3Q99457 506 aaPredicted RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 NAPGQ99747 312 aaPredicted RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 IL22Q9GZX6 179 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 KLHL25Q9H0H3 589 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 IMP3Q9NV31 184 aaKnown RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 PDP2Q9P2J9 529 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 PCYOX1Q9UHG3 505 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 ERRFI1Q9UJM3 462 aaPredicted RBP6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 CROTQ9UKG9 612 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 RIMKLBQ9ULI2 386 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 RPS6KL1Q9Y6S9 549 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
TRIM53CP-201ENST00000531490 CELSR1Q9NYQ6 3014 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 MYOCOSA0A1B0GUC4 107 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 C17orf113A0A1B0GUU1 675 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CTAGE9A4FU28 777 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 WIPF3A6NGB9 483 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 BANF1O75531 89 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 RFPL1O75677 317 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 UBXN7O94888 489 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 TPBGLP0DKB5 382 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 RALBP11234 206 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 MTHFD1P11586 935 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC2A4P14672 509 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 AMD1P17707 334 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 VCLP18206 1134 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CASQ1P31415 396 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CCR7P32248 378 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 DLSTP36957 453 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 NSG1P42857 185 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 LEPRP48357 1165 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 FNTAP49354 379 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CSE1LP55060 971 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 TUBB4BP68371 445 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 PRAMEP78395 509 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CDK16Q00536 496 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 ABHD18Q0P651 414 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CHAF1BQ13112 559 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 PRKG2Q13237 762 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CLPPQ16740 277 aaPredicted RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 FASTKD1Q53R41 847 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZNF789Q5FWF6 425 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 RNASEH2BQ5TBB1 312 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 C1QL3Q5VWW1 255 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 CPZQ66K79 652 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 GALNT18Q6P9A2 607 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 WDR74Q6RFH5 385 aaPredicted RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 NLRP9Q7RTR0 991 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 MAMDC2Q7Z304 686 aaPredicted RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 TICAM1Q8IUC6 712 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 VRK3Q8IV63 474 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 TRIM48Q8IWZ4 208 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 KRT222Q8N1A0 295 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 MCUQ8NE86 351 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 PPHLN1Q8NEY8 458 aaKnown RBP6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 OR10G6Q8NH81 332 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 SH3KBP1Q96B97 665 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 SGSM3Q96HU1 749 aa6.77□□□□□ -1.33
TRIM53CP-201ENST00000531490 RMDN2Q96LZ7 410 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms