RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 TCRBV9S1A1TA0A576 114 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 OR2AG2A6NM03 316 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 AQP9O43315 295 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 AP2A2O94973 939 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TNFP01375 233 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 GSTA2P09210 222 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 MSH3P20585 1137 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 RPS3P23396 243 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 GABRB3P28472 473 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 NSG1P42857 185 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TTPAP49638 278 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 BLKP51451 505 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 CLCNKAP51800 687 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 VSNL1P62760 191 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 MPP1Q00013 466 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 DMPKQ09013 629 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 SLC14A1Q13336 389 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 C1orf61Q13536 156 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 RIN1Q13671 783 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 ERCC6LQ2NKX8 1250 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 HSP90AA5PQ58FG0 334 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 CTSL3PQ5NE16 218 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TEDDM1Q5T9Z0 273 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 LYPLAL1Q5VWZ2 237 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF470Q6ECI4 717 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 MRNIPQ6NTE8 343 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF549Q6P9A3 640 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TMEM220Q6QAJ8 160 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 CYS1Q717R9 158 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 DET1Q7L5Y6 550 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 RD3Q7Z3Z2 195 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 LRRTM4Q86VH4 590 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 GALNT13Q8IUC8 556 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 ULK2Q8IYT8 1036 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 FSTL5Q8N475 847 aaPredicted RBP8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 GDAP1Q8TB36 358 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 LKAAEAR1Q8TD35 194 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 LMX1AQ8TE12 382 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 PYROXD1Q8WU10 500 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 SGF29Q96ES7 293 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 TIMM29Q9BSF4 260 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 RTKNQ9BST9 563 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 FUT8Q9BYC5 575 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 SLC13A1Q9BZW2 595 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 CDC42EP4Q9H3Q1 356 aaKnown RBP8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 IARS2Q9NSE4 1012 aaKnown RBP8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 SPASTQ9UBP0 616 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 FBXO5Q9UKT4 447 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 GPR34Q9UPC5 381 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 BTBD3Q9Y2F9 522 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 MED16Q9Y2X0 877 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 ASB1Q9Y576 335 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 DMRT1Q9Y5R6 373 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 CSNK1G3Q9Y6M4 447 aa8.55□□□□□ -1.04
CCDC90B-217ENST00000530253 WDFY3Q8IZQ1 3526 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 LY6G6EA0A0G2JKS1 128 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 FAM159BA6NKW6 160 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 CXorf49A8MYA2 514 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 LMO7DNF2Z398 122 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 TRIM38O00635 465 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 PRMT5O14744 637 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 KMOO15229 486 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 YY2O15391 372 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 CBFA2T3O75081 653 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 POP7O75817 140 aaKnown RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 EML2O95834 649 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ACP5P13686 325 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ATP1B2P14415 290 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 AK4P27144 223 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 LEPRP48357 1165 aaKnown RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ATXN3P54252 364 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ADARP55265 1226 aaKnown RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 TUBB4BP68371 445 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 MGAT5Q09328 741 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 CTBP1Q13363 440 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 THOC5Q13769 683 aaKnown RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 GTF2H3Q13889 308 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 TCEA2Q15560 299 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 KYNUQ16719 465 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 RNF187Q5TA31 235 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF449Q6P9G9 518 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 CCNI2Q6ZMN8 369 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 FAM83HQ6ZRV2 1179 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 KIAA0408Q6ZU52 694 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 CHST15Q7LFX5 561 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 GALNT7Q86SF2 657 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 C17orf82Q86X59 251 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 TRAPPC5Q8IUR0 188 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 SFTPA2Q8IWL1 248 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 HIPK4Q8NE63 616 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 OR4C6Q8NH72 309 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 DCUN1D1Q96GG9 259 aa8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 ZNF514Q96K75 400 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-217ENST00000530253 SMURF1Q9HCE7 757 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms