RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 DNAJA4Q8WW22 397 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-225ENST00000530094 LRIG1Q96JA1 1093 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 ZNF570Q96NI8 536 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SMOQ99835 787 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SLCO1B3Q9NPD5 702 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SUSD2Q9UGT4 822 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 FBXO9Q9UK97 447 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-225ENST00000530094 FAM240BA0A1B0GVZ2 78 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 FAM221BA6H8Z2 402 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 HAS3O00219 553 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SOX30O94993 753 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 RYKP34925 604 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SCN1BQ07699 218 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 ARMCX6Q7L4S7 300 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 LDB1Q86U70 411 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-225ENST00000530094 ZSCAN4Q8NAM6 433 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-225ENST00000530094 LRRN4CLQ8ND94 238 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SETD6Q8TBK2 473 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 PLEKHO2Q8TD55 490 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 GEMIN6Q8WXD5 167 aaKnown RBP8.25□□□□□ -1.09
CTNND1-225ENST00000530094 SFXN1Q9H9B4 322 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 STOML2Q9UJZ1 356 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 ACSL5Q9ULC5 683 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 U3KQV3 271 aa8.25□□□□□ -1.09
CTNND1-225ENST00000530094 DAPL1A0PJW8 107 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 NPIPA5E9PKD4 350 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 FAM155BO75949 473 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 IDH3AP50213 366 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SUOXP51687 545 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 KCNJ2P63252 427 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 PPM1JQ5JR12 505 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TOR1AIP1Q5JTV8 583 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 ZNF641Q96N77 438 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 PTGES2Q9H7Z7 377 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 FBRSQ9HAH7 460 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 NPIPA1Q9UND3 350 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 WASF3Q9UPY6 502 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 PRKAB1Q9Y478 270 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 CACNA1SQ13698 1873 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 METTL21EPA6NDL7 271 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 OR5K4A6NMS3 321 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 HSD11B1P28845 292 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 WDR5P61964 334 aaKnown RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SLC10A7Q0GE19 358 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 CBX3Q13185 183 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 E2F2Q14209 437 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 CA9Q16790 459 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 RTP2Q5QGT7 225 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 RAB43Q86YS6 212 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TMEM156Q8N614 296 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LRRC15Q8TF66 581 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 DIRAS2Q96HU8 199 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LRRC3Q9BY71 257 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 POPDC3Q9HBV1 291 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TMEM248Q9NWD8 314 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 PCDHB3Q9Y5E6 796 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 GRXCR1A8MXD5 290 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 NDUFS4O43181 175 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 RLN2P04090 185 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SHMT2P34897 504 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TSPAN5P62079 268 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LRIF1Q5T3J3 769 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 C22orf39Q6P5X5 142 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 DCUN1D3Q8IWE4 304 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 OR10H4Q8NGA5 316 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 ZDHHC12Q96GR4 267 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 REXO2Q9Y3B8 237 aaKnown RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 ZNF487B1APH4 448 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 H3BQ06 376 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LEFTY2O00292 366 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SNX4O95219 450 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 KAT7O95251 611 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 HLA-DQB2P05538 268 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 CDH1P12830 882 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 HOXD13P35453 343 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 ZNF41P51814 821 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 CASP6P55212 293 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 VLDLRP98155 873 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SIM2Q14190 667 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TYSND1Q2T9J0 566 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LACTB2Q53H82 288 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 SIRPB2Q5JXA9 342 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 UBAP2Q5T6F2 1119 aaKnown RBP8.24□□□□□ -1.09
CTNND1-225ENST00000530094 FBXL22Q6P050 247 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 USP30Q70CQ3 517 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 FAM46DQ8NEK8 389 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 OR10A6Q8NH74 314 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 LMX1AQ8TE12 382 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 KLHDC7BQ96G42 594 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 TRIB3Q96RU7 358 aa8.24□□□□□ -1.09
CTNND1-225ENST00000530094 GATA5Q9BWX5 397 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms