RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 DOPEY2Q9Y3R5 2298 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 HYKKA2RU49 373 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 E7ENX8 843 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 ONECUT2O95948 504 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 IGHEP01854 428 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 ALBP02768 609 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 CASQ1P31415 396 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
SSH3-206ENST00000529224 PGDP52209 483 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 CDKN2DP55273 166 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSH3-206ENST00000529224 TAP2Q03519 686 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 KLRB1Q12918 225 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SP140Q13342 867 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
SSH3-206ENST00000529224 ATP1A4Q13733 1029 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 THEMIS2Q5TEJ8 643 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 MRPL14Q6P1L8 145 aaKnown RBP12.51□□□□□ -0.41
SSH3-206ENST00000529224 FBXO42Q6P3S6 717 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 TRMT10BQ6PF06 316 aaKnown RBP12.51□□□□□ -0.41
SSH3-206ENST00000529224 PAQR3Q6TCH7 311 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 OVCH1Q7RTY7 1134 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 PAQR7Q86WK9 346 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 MYO1HQ8N1T3 1032 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 TEX19Q8NA77 164 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 PTERQ96BW5 349 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 WDR83Q9BRX9 315 aaKnown RBP12.51□□□□□ -0.41
SSH3-206ENST00000529224 PARVBQ9HBI1 364 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SNX24Q9Y343 169 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 SVILO95425 2214 aa12.51□□□□□ -0.41
SSH3-206ENST00000529224 LOC105369274A0A096LPK9 316 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 IGKV1-8A0A0C4DH67 115 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 LOC102723532A0A0G2JNH3 316 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 E7ESA3 106 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 H0YGG7 62 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PEX12O00623 359 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 TP73O15350 636 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 SLC16A5O15375 505 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 NRP2O60462 931 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 EIF2S1P05198 315 aaKnown RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 EZRP15311 586 aaKnown RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 ITGAXP20702 1163 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 IMPA1P29218 277 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 EMP3P54852 163 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 IL2P60568 153 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 ARF3P61204 181 aaPredicted RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 ETF1P62495 437 aaKnown RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 FOXK1P85037 733 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 RELAQ04206 551 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 MGAT5Q09328 741 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 MUM1Q2TAK8 710 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 ZNF425Q6IV72 752 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 OR4N4Q8N0Y3 316 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 FER1L6-AS2Q96M78 137 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 SLC26A1Q9H2B4 701 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 WDR54Q9H977 334 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 CCDC177Q9NQR7 707 aaPredicted RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 WHRNQ9P202 907 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 STOX2Q9P2F5 926 aaPredicted RBP12.5□□□□□ -0.41
SSH3-206ENST00000529224 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PDE10AQ9Y233 779 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 VWA7Q9Y334 891 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PCDHGB7Q9Y5F8 929 aa12.5□□□□□ -0.41
SSH3-206ENST00000529224 PABPN1LA6NDY0 278 aaKnown RBP12.49□□□□□ -0.41
SSH3-206ENST00000529224 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
SSH3-206ENST00000529224 CEACAM4O75871 244 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 PDGFAP04085 211 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 FDXRP22570 491 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 HRH2P25021 359 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 OR1D4P47884 311 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSH3-206ENST00000529224 CBLBQ13191 982 aa12.49□□□□□ -0.41
SSH3-206ENST00000529224 PRTGQ2VWP7 1150 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms