RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 DHX34Q14147 1143 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ERV3-1Q14264 604 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 GRB7Q14451 532 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 KCNAB1Q14722 419 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 PPP1R7Q15435 360 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF789Q5FWF6 425 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 MRNIPQ6NTE8 343 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 UNC5AQ6ZN44 842 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 CENPUQ71F23 418 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 SDCCAG8Q86SQ7 713 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 AMIGO1Q86WK6 493 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 LRRC6Q86X45 466 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 KMT5CQ86Y97 462 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 PPIL6Q8IXY8 311 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 TBC1D21Q8IYX1 336 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 CARFQ8N187 725 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 D2HGDHQ8N465 521 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 SIDT2Q8NBJ9 832 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 FLVCR1-AS1Q8TAF5 88 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ASZ1Q8WWH4 475 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 LPGAT1Q92604 370 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 RNF31Q96EP0 1072 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ELMO2Q96JJ3 720 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 TCF12Q99081 682 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 HGH1Q9BTY7 390 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 MENTQ9BUN1 341 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 TRIT1Q9H3H1 467 aaKnown RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 SRMSQ9H3Y6 488 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 XKR8Q9H6D3 395 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 C1GALT1Q9NS00 363 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ARGLU1Q9NWB6 273 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-212ENST00000528930 IL1RAPL1Q9NZN1 696 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ICKQ9UPZ9 632 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 ASF1AQ9Y294 204 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 BTRCQ9Y297 605 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 PCDHGB6Q9Y5F9 930 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 RPS6KL1Q9Y6S9 549 aa8.15□□□□□ -1.1
SSBP3-212ENST00000528930 A0A1B0GUH1 482 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CTAGE9A4FU28 777 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SLC9B1P1A6NJY1 282 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 MATN2O00339 956 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 TP73O15350 636 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CEACAM4O75871 244 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 USP1O94782 785 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 APOA4P06727 396 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 F7P08709 466 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 STSP08842 583 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ST6GAL1P15907 406 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PAMP19021 973 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 FMO4P31512 558 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ACY1Q03154 408 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 TLE4Q04727 773 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ABRQ12979 859 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PRKAA1Q13131 559 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 MAP7Q14244 749 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 GBX1Q14549 363 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 KYNUQ16719 465 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SYTL3Q4VX76 610 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 DNAJC21Q5F1R6 531 aaKnown RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SAMD5Q5TGI4 173 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PTRHD1Q6GMV3 140 aaKnown RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PWWP2BQ6NUJ5 590 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ARMC6Q6NXE6 501 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CASC4Q6P4E1 433 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PPP1R3BQ86XI6 285 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CILP2Q8IUL8 1156 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 DENND6AQ8IWF6 608 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PHC2Q8IXK0 858 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 KLHL7Q8IXQ5 586 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 C17orf53Q8N3J3 647 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CISD2Q8N5K1 135 aaKnown RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ZNF501Q96CX3 271 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 TRAPPC9Q96Q05 1148 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PANX3Q96QZ0 392 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SMR3AQ99954 134 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 TSSK1BQ9BXA7 367 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PITPNM3Q9BZ71 974 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SPHK1Q9NYA1 384 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ACTR10Q9NZ32 417 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-212ENST00000528930 SAMD15Q9P1V8 674 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 GALPQ9UBC7 116 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 ASIC3Q9UHC3 531 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 POLG2Q9UHN1 485 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 GNPTGQ9UJJ9 305 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 RARRES3Q9UL19 164 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PLAGL1Q9UM63 463 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 OSGIN2Q9Y236 505 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 NTNG1Q9Y2I2 539 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 CRYL1Q9Y2S2 319 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 MED16Q9Y2X0 877 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 FAM169AQ9Y6X4 670 aa8.14□□□□□ -1.11
SSBP3-212ENST00000528930 PIPSLA2A3N6 862 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 GSAPA4D1B5 854 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms