RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PARVBQ9HBI1 364 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 MOCS1Q9NZB8 636 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 ZFATQ9P243 1243 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 PDE10AQ9Y233 779 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 VWA7Q9Y334 891 aa31.59■■■□□ 2.65
SSSCA1-205ENST00000527920 LOC105369274A0A096LPK9 316 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 LOC102723532A0A0G2JNH3 316 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 HYKKA2RU49 373 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 TSPAN12O95859 305 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 IGHEP01854 428 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 FDXRP22570 491 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 KLRB1Q12918 225 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 ATP1A4Q13733 1029 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 PRTGQ2VWP7 1150 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 FAM45BPQ6NSW5 357 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 PRMT9Q6P2P2 845 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 ANKMY2Q8IV38 441 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 OR4N4Q8N0Y3 316 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 FAM45AQ8TCE6 357 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 LINGO1Q96FE5 620 aa31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 NXT1Q9UKK6 140 aaKnown RBP31.58■■■□□ 2.65
SSSCA1-205ENST00000527920 K7EM74 188 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 HRH2P25021 359 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 IL2P60568 153 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 ILF2Q12905 390 aaKnown RBP31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 CHAF1BQ13112 559 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 CALCOCO2Q13137 446 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 PDAP1Q13442 181 aaKnown RBP31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 SLC9A5Q14940 896 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 FASTKD3Q14CZ7 662 aaKnown RBP31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 HECTD2Q5U5R9 776 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 COX15Q7KZN9 410 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 GPATCH11Q8N954 259 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 SLC25A23Q9BV35 468 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 PCBD2Q9H0N5 130 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 CCDC177Q9NQR7 707 aaPredicted RBP31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 STOX2Q9P2F5 926 aaPredicted RBP31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 ADAMTS6Q9UKP5 1117 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 PCDHGB7Q9Y5F8 929 aa31.57■■■□□ 2.64
SSSCA1-205ENST00000527920 UMODP07911 640 aa31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 OTX2P32243 289 aa31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 MUM1Q2TAK8 710 aa31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 SLC26A11Q86WA9 606 aa31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 C17orf53Q8N3J3 647 aaPredicted RBP31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 OR2A5Q96R48 311 aa31.56■■■□□ 2.64
SSSCA1-205ENST00000527920 H0YGG7 62 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 RAD51CO43502 376 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 NR1D1P20393 614 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 CCL11P51671 97 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 PGDP52209 483 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 ARF3P61204 181 aaPredicted RBP31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 THEMIS2Q5TEJ8 643 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 SYT10Q6XYQ8 523 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 FER1L6-AS2Q96M78 137 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 NSMCE4AQ9NXX6 385 aa31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 G3BP2Q9UN86 482 aaKnown RBP31.55■■■□□ 2.64
SSSCA1-205ENST00000527920 TXNDC9O14530 226 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 EIF3HO15372 352 aaKnown RBP eCLIP31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 CCND1P24385 295 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 TBPL1P62380 186 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 NKG7Q16617 165 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 DUPD1Q68J44 220 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 ZNF572Q7Z3I7 529 aaPredicted RBP31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 ZBED8Q8IZ13 594 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 MVB12AQ96EY5 273 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 PDLIM5Q96HC4 596 aaKnown RBP31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 SPSB2Q99619 263 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 EPN3Q9H201 632 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 PSAT1Q9Y617 370 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 PCM1Q15154 2024 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 MED13Q9UHV7 2174 aa31.54■■■□□ 2.64
SSSCA1-205ENST00000527920 PEX12O00623 359 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 WISP1O95388 367 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 PDGFAP04085 211 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 EIF2S1P05198 315 aaKnown RBP31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 CSRP3P50461 194 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 AP1S2P56377 157 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 TLE1Q04724 770 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 GARNL3Q5VVW2 1013 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 PRAMEF13Q5VWM6 474 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 PPP1R32Q7Z5V6 425 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 ZC3HC1Q86WB0 502 aaKnown RBP31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 CSNK1A1LQ8N752 337 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 C10orf90Q96M02 699 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 OLFM1Q99784 485 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 PHACTR1Q9C0D0 580 aa31.53■■■□□ 2.64
SSSCA1-205ENST00000527920 MED26O95402 600 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 HIST1H2AGP0C0S8 130 aaPredicted RBP31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 HIST1H2ADP20671 130 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 MMP11P24347 488 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 MRPS25P82663 173 aaKnown RBP31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 C2orf54Q08AI8 447 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 PHKG1Q16816 387 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 AGTRAPQ6RW13 159 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 HPS6Q86YV9 775 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 TEX19Q8NA77 164 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 RERGQ96A58 199 aaPredicted RBP31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 HIST1H2AHQ96KK5 128 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 HIST1H2AJQ99878 128 aa31.52■■■□□ 2.64
SSSCA1-205ENST00000527920 H2AFJQ9BTM1 129 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms