RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CAPN12Q6ZSI9 719 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 CYS1Q717R9 158 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 ABHD17AQ96GS6 310 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 PDLIM5Q96HC4 596 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 PCBD2Q9H0N5 130 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 CCDC177Q9NQR7 707 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 ABCF3Q9NUQ8 709 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 LOC105369274A0A096LPK9 316 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 LOC102723532A0A0G2JNH3 316 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 RFPL1O75677 317 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 ONECUT2O95948 504 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 GSTA2P09210 222 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 PIM1P11309 404 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 PGGT1BP53609 377 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 FAM69BQ5VUD6 431 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 MRPL14Q6P1L8 145 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 OR4N4Q8N0Y3 316 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 C9orf43Q8TAL5 461 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 FBXO25Q8TCJ0 367 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 CDKL2Q92772 493 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 TRIM54Q9BYV2 358 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 RHOJQ9H4E5 214 aa25.21■■□□□ 1.63
TSPAN4-217ENST00000527644 FAM95CA0A1B0GW59 222 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 HYKKA2RU49 373 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 PABPN1LA6NDY0 278 aaKnown RBP25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 MKRN2OSH3BPM6 223 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 TUBB4AP04350 444 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 HRH2P25021 359 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 TRADDQ15628 312 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 PHKG1Q16816 387 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 AGTRAPQ6RW13 159 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 C3orf62Q6ZUJ4 267 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 MCMBPQ9BTE3 642 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 SMYD2Q9NRG4 433 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 SLC22A11Q9NSA0 550 aa25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 HEMK1Q9Y5R4 338 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-217ENST00000527644 HEATR5BQ9P2D3 2071 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 H0YGG7 62 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 EIF2S1P05198 315 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 EZRP15311 586 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 ITGAXP20702 1163 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 SAT1P21673 171 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 CCND1P24385 295 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 AP1S2P56377 157 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 ARF3P61204 181 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 TBPL1P62380 186 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 SSPNQ14714 243 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 SLC9A5Q14940 896 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 PRAMEF13Q5VWM6 474 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 C8orf74Q6P047 294 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 ZDHHC24Q6UX98 284 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 RAB43Q86YS6 212 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 NKAPQ8N5F7 415 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 OR2Y1Q8NGV0 311 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 ZNF592Q92610 1267 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 FKBP10Q96AY3 582 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 VPS39Q96JC1 886 aa25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 PTRH2Q9Y3E5 179 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-217ENST00000527644 TCRBV9S1A1TA0A576 114 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ALBP02768 609 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ENO2P09104 434 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ATXN8OSP0DMR3 200 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ZNF37AP17032 561 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 FOLR3P41439 243 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 EMP3P54852 163 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 TAS2R39P59534 338 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 PRTGQ2VWP7 1150 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 TMEM207Q6UWW9 146 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 MBOAT1Q6ZNC8 495 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 OVCH1Q7RTY7 1134 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ADCK2Q7Z695 626 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ANKRD7Q92527 254 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 IP6K3Q96PC2 410 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 OR2A5Q96R48 311 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 LRRC1Q9BTT6 524 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ATG10Q9H0Y0 220 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ING2Q9H160 280 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 TMEM184CQ9NVA4 438 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 CUEDC1Q9NWM3 386 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ARL15Q9NXU5 204 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 TXNDC16Q9P2K2 825 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 TLK1Q9UKI8 766 aa25.18■■□□□ 1.62
TSPAN4-217ENST00000527644 ARGFXA6NJG6 315 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 CXorf49A8MYA2 514 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 H7BY64 318 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 CNOT3O75175 753 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 MAGEA4P43358 317 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 GPX6P59796 221 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 SLC7A5Q01650 507 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 NAE1Q13564 534 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 MUM1Q2TAK8 710 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 CCDC25Q86WR0 208 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 RERGQ96A58 199 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 PTERQ96BW5 349 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 PRAP1Q96NZ9 151 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 POPDC3Q9HBV1 291 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 ZNF71Q9NQZ8 489 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 ACSS2Q9NR19 701 aa25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 NOVA2Q9UNW9 492 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-217ENST00000527644 BSNQ9UPA5 3926 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms