RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 KRT6AP02538 564 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 KRT6BP04259 564 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 DNAJA1P31689 397 aaKnown RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 KRT6CP48668 564 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 NEK2P51955 445 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CXCR4P61073 352 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 MVKQ03426 396 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 KEAP1Q14145 624 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 MAD2L1BPQ15013 274 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF404Q494X3 552 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CNKSR3Q6P9H4 555 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 MBOAT1Q6ZNC8 495 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 NEK10Q6ZWH5 1172 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 DENND1CQ8IV53 801 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SLC22A15Q8IZD6 547 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 FBLIM1Q8WUP2 373 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CAPSLQ8WWF8 208 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SELENOMQ8WWX9 145 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 PDLIM5Q96HC4 596 aaKnown RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SIAEQ9HAT2 523 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ZBTB20Q9HC78 741 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 TM9SF3Q9HD45 589 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ERVK-11Q9UQG0 969 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 DLGAP4Q9Y2H0 992 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 GON4LQ3T8J9 2241 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ASNA1O43681 348 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 OAZ2O95190 189 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 FABP3P05413 133 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ALOX12P18054 663 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ATF6P18850 670 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 DGKAP23743 735 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 KRT20P35900 424 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SLC11A2P49281 568 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CAPN13Q6MZZ7 669 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 PRSS48Q7RTY5 328 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 SNX20Q7Z614 316 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CALHM3Q86XJ0 350 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CHPFQ8IZ52 775 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CDC26Q8NHZ8 85 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 EFHD2Q96C19 240 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-208ENST00000527323 PYCR2Q96C36 320 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 TPD52L3Q96J77 140 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CLSTN3Q9BQT9 956 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 P2RY12Q9H244 342 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ASB8Q9H765 288 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 GPRC5BQ9NZH0 403 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 HSPE1-MOB4S4R3N1 261 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 HIDE1A8MVS5 230 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 RFXAPO00287 272 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 UPK1BO75841 260 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 GLUD1P00367 558 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CXCL10P02778 98 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ALPIP09923 528 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CR2P20023 1033 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 FPR1P21462 350 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ACVR2AP27037 513 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TRPC1P48995 793 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PLD1Q13393 1074 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PLPP4Q5VZY2 271 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 KDM4DQ6B0I6 523 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF621Q6ZSS3 439 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TSPYL5Q86VY4 417 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CCDC103Q8IW40 242 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CARNMT1Q8N4J0 409 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 SLC38A4Q969I6 547 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TOX2Q96NM4 488 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 RUBCNLQ9H714 662 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 REEP1Q9H902 201 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 IL1RAPQ9NPH3 570 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ITM2CQ9NQX7 267 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 DOCK4Q8N1I0 1966 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 WNT9AO14904 365 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 STK16O75716 305 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 NTRK1P04629 796 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 EBLN1P0CF75 366 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 GTF2E2P29084 291 aaKnown RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 S100A5P33763 92 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 EIF2DP41214 584 aaKnown RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CDH4P55283 916 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CREMQ03060 361 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 RING1Q06587 406 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 SF3B4Q15427 424 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■■■■■ 31.6
CAPN1-208ENST00000527323 TAF12Q16514 161 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 C6orf183Q5T699 404 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 OR4F3Q6IEY1 312 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TRIM46Q7Z4K8 759 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 LYSMD2Q8IV50 215 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms