RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 ITGA2P17301 1181 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 AOAHP28039 575 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 EEFSECP57772 596 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 NDUFA9Q16795 377 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 DDHD1Q8NEL9 900 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 NSMCE3Q96MG7 304 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ZNF607Q96SK3 696 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 C1QTNF1Q9BXJ1 281 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 TET1Q8NFU7 2136 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 A0A1W2PRB8 838 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 PRRT4C9JH25 899 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 PPP6CO00743 305 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ERI3O43414 337 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SLC28A2O43868 658 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 RSL1D1O76021 490 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 LHCGRP22888 699 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 MMP12P39900 470 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 P2RY2P41231 377 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 FBXW4P57775 412 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 EPS8Q12929 822 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 TRAP1Q12931 704 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 HSPB3Q12988 150 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 GRIK2Q13002 908 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 RPA4Q13156 261 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 RFTN2Q52LD8 501 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 USP39Q53GS9 565 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 PNCKQ6P2M8 343 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 FBXL8Q96CD0 374 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SLC47A1Q96FL8 570 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 BIRC8Q96P09 236 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 KRCC1Q9NPI7 259 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 AKAP7Q9P0M2 348 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ZNF282Q9UDV7 671 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 TNFAIP8O95379 198 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SHMT2P34897 504 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 EIF2DP41214 584 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 MAGEA12P43365 314 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 TNFRSF4P43489 277 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 HTR6P50406 440 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 FOXM1Q08050 763 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 MTX3Q5HYI7 312 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 NOXRED1Q6NXP6 359 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 LETMD1Q6P1Q0 360 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 METTL2BQ6P1Q9 378 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 UNC5DQ6UXZ4 953 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ARL10Q8N8L6 244 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 CLIP3Q96DZ5 547 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 RMND5BQ96G75 393 aaPredicted RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 CIB1Q99828 191 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 ROGDIQ9GZN7 287 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 AIG1Q9NVV5 245 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SUCOQ9UBS9 1254 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 C3orf18Q9UK00 162 aa8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 SAMHD1Q9Y3Z3 626 aaKnown RBP8.56□□□□□ -1.04
PPFIA1-206ENST00000526262 A0A0J9YVX5 310 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 MT-ND1P03886 318 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 GBAP04062 536 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 FOXA1P55317 472 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 XIAPP98170 497 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ADRM1Q16186 407 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 GCNT6Q5T4J0 391 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 TTC23Q5W5X9 447 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 PRR23BQ6ZRT6 265 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ADAMTS15Q8TE58 950 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 SETD7Q8WTS6 366 aaKnown RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ELSPBP1Q96BH3 223 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 LRCH3Q96II8 777 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 MVB12BQ9H7P6 319 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 STOX2Q9P2F5 926 aaPredicted RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 RPS6KB2Q9UBS0 482 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ENOPH1Q9UHY7 261 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 GPR34Q9UPC5 381 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 TSC22D4Q9Y3Q8 395 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 CLIC1O00299 241 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 PDPK1O15530 556 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 NDUFS4O43181 175 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 LATO43561 262 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 TBX10O75333 385 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 HNRNPA2B1P22626 353 aaKnown RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 PRDX3P30048 256 aaKnown RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 CLCN7P51798 805 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 EPHA5P54756 1037 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 MRPS21P82921 87 aaKnown RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 DAB2P98082 770 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 CDK3Q00526 305 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ZIK1Q3SY52 487 aaPredicted RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 NEK10Q6ZWH5 1172 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 RASGEF1AQ8N9B8 481 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 AVL9Q8NBF6 648 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 TRPV3Q8NET8 790 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 MCCC1Q96RQ3 725 aaPredicted RBP8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 LYSMD1Q96S90 227 aa8.55□□□□□ -1.04
PPFIA1-206ENST00000526262 MYADMQ96S97 322 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms