RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PGGT1BP53609 377 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 VSX2P58304 361 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 RPS15AP62244 130 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SKP1P63208 163 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 RELAQ04206 551 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 IFFO1Q0D2I5 559 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 DNASE1L3Q13609 305 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TGFBIQ15582 683 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TGIF1Q15583 401 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZIC1Q15915 447 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NDUFA9Q16795 377 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 PPP1R3AQ16821 1122 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 MUM1Q2TAK8 710 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 COL28A1Q2UY09 1125 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM214AQ32MH5 1076 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDKL4Q5MAI5 379 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARHGAP40Q5TG30 622 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 FCRL6Q6DN72 434 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SULT1C3Q6IMI6 304 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 C19orf48Q6RUI8 117 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 LCTLQ6UWM7 567 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SBSNQ6UWP8 590 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMEM207Q6UWW9 146 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 MBOAT1Q6ZNC8 495 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 RNF44Q7L0R7 432 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPR155Q7Z3F1 870 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CMC1Q7Z7K0 106 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMPRSS11BQ86T26 416 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM20CQ8IXL6 584 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 GSPT2Q8IYD1 628 aaKnown RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPATA6LQ8N4H0 392 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 DNAJC22Q8N4W6 341 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CSNK1A1LQ8N752 337 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SNX31Q8N9S9 440 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 LRRN4CLQ8ND94 238 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR56A3Q8NH54 315 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANKRD49Q8WVL7 239 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC5A11Q8WWX8 675 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 KIAA1191Q96A73 305 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 THAP11Q96EK4 314 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SCYL1Q96KG9 808 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CATSPER2Q96P56 530 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SGPP1Q9BX95 441 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPR87Q9BY21 358 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TWSG1Q9GZX9 223 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ALG9Q9H6U8 611 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM60AQ9NP50 221 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC6A20Q9NP91 592 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 LHX9Q9NQ69 397 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMEM184CQ9NVA4 438 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 NUDT4Q9NZJ9 180 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 IFT80Q9P2H3 777 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 PSMC3IPQ9P2W1 217 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 FETUBQ9UGM5 382 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CROTQ9UKG9 612 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMCO1Q9UM00 188 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDC14AQ9UNH5 594 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 LHX6Q9UPM6 363 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANGPTL3Q9Y5C1 460 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLK4Q9Y5K2 254 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 RP1P56715 2156 aa5.18□□□□□ -1.58
HMGB1P40-201ENST00000525121 COL27A1Q8IZC6 1860 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ASXL3Q9C0F0 2248 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TEX51A0A1B0GUA7 166 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 HYKKA2RU49 373 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SMIM23A6NLE4 172 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TRIM49D1C9J1S8 452 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 H7BY64 318 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 K7ENP7 123 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 HAT1O14929 419 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CLGNO14967 610 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DSCR3O14972 297 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 EFSO43281 561 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCNT2O60583 730 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CTSVO60911 334 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SMIM24O75264 130 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 STK16O75716 305 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLHL2O95198 593 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 C2P06681 752 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RBP1P09455 135 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RAB40ALP0C0E4 278 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM153BP0C7A2 387 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRKAR1AP10644 381 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 COL6A2P12110 1019 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CD1DP15813 335 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 KRT15P19012 456 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 GNAZP19086 355 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ITGAXP20702 1163 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CXCR2P25025 360 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 HPDP32754 393 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARL1P40616 181 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 FOLR3P41439 243 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 GLRBP48167 497 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PIK3CGP48736 1102 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 EMP3P54852 163 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DCDP81605 110 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RHDQ02161 417 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RGS1Q08116 209 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPS2Q13227 327 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC29A2Q14542 456 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms