RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SKIV2L2P42285 1042 aaKnown RBP17.73■□□□□ 0.43
CAPN1-203ENST00000525013 RGS4P49798 205 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 ARF3P61204 181 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-203ENST00000525013 TAP2Q03519 686 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 PRDX1Q06830 199 aaKnown RBP17.73■□□□□ 0.43
CAPN1-203ENST00000525013 NADK2Q4G0N4 442 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 DCAF10Q5QP82 559 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 SHISA6Q6ZSJ9 500 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 PPP1R32Q7Z5V6 425 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 ADCK2Q7Z695 626 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 PALM2Q8IXS6 379 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 EEF1AKMT1Q8WVE0 214 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 COL26A1Q96A83 441 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 CERS2Q96G23 380 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 CABS1Q96KC9 395 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 NUDT9Q9BW91 350 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 TRIM31Q9BZY9 425 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 WDR54Q9H977 334 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 ANKMY1Q9P2S6 941 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 CTSFQ9UBX1 484 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 CDC23Q9UJX2 597 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 CHMP2BQ9UQN3 213 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 PCDHGB7Q9Y5F8 929 aa17.73■□□□□ 0.43
CAPN1-203ENST00000525013 IGKV1-8A0A0C4DH67 115 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 CCDC188H7C350 402 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 EIF3FO00303 357 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-203ENST00000525013 ONECUT2O95948 504 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 AHSGP02765 367 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 GABRB3P28472 473 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 ITGA8P53708 1063 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 NKG7Q16617 165 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 HIF1AQ16665 826 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 MUM1Q2TAK8 710 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 RBM20Q5T481 1227 aaKnown RBP17.72■□□□□ 0.43
CAPN1-203ENST00000525013 LRRC8EQ6NSJ5 796 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 COX15Q7KZN9 410 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 PAQR7Q86WK9 346 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 MCOLN3Q8TDD5 553 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 MFRPQ9BY79 579 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 SOX17Q9H6I2 414 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-203ENST00000525013 ZNF304Q9HCX3 659 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 ENAMQ9NRM1 1142 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 SLC17A6Q9P2U8 582 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 LRRK2Q5S007 2527 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 PTPN13Q12923 2485 aa17.72■□□□□ 0.43
CAPN1-203ENST00000525013 MASP2O00187 686 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 DPM1O60762 260 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 MED26O95402 600 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 MMP11P24347 488 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 IMPA1P29218 277 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 CDKN2DP55273 166 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 ARL4CP56559 192 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 ABATP80404 500 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 TIAL1Q01085 375 aaKnown RBP eCLIP17.71■□□□□ 0.43
CAPN1-203ENST00000525013 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-203ENST00000525013 PAQR3Q6TCH7 311 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 CNTN4Q8IWV2 1026 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 MYO1HQ8N1T3 1032 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 GALNT16Q8N428 558 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 CSNK1A1LQ8N752 337 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 RERGQ96A58 199 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-203ENST00000525013 SNF8Q96H20 258 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 SLC26A1Q9H2B4 701 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 NXT1Q9UKK6 140 aaKnown RBP17.71■□□□□ 0.43
CAPN1-203ENST00000525013 ADAMTS6Q9UKP5 1117 aa17.71■□□□□ 0.43
CAPN1-203ENST00000525013 H7BY64 318 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 AGPSO00116 658 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 C8GP07360 202 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 EZRP15311 586 aaKnown RBP17.7■□□□□ 0.42
CAPN1-203ENST00000525013 OCA2Q04671 838 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 TEDDM1Q5T9Z0 273 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 ZNF425Q6IV72 752 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 PRMT9Q6P2P2 845 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 TRMT10BQ6PF06 316 aaKnown RBP17.7■□□□□ 0.42
CAPN1-203ENST00000525013 ANKMY2Q8IV38 441 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 PRSS58Q8IYP2 241 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 ALKBH8Q96BT7 664 aaKnown RBP17.7■□□□□ 0.42
CAPN1-203ENST00000525013 LRRC39Q96DD0 335 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 LINGO1Q96FE5 620 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 C10orf90Q96M02 699 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 CCDC138Q96M89 665 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 PRAP1Q96NZ9 151 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 KRT12Q99456 494 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 SPSB2Q99619 263 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 ATP13A2Q9NQ11 1180 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 CCDC177Q9NQR7 707 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-203ENST00000525013 CUEDC1Q9NWM3 386 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-203ENST00000525013 FBXL4Q9UKA2 621 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 PDE10AQ9Y233 779 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 TEX264Q9Y6I9 313 aa17.7■□□□□ 0.42
CAPN1-203ENST00000525013 SCN3AQ9NY46 2000 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 COL12A1Q99715 3063 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 EFCAB8A8MWE9 144 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 SEC31AO94979 1220 aaKnown RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 ALPPP05187 535 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 FBLP22087 321 aaKnown RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 PDAP1Q13442 181 aaKnown RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 MYBPC3Q14896 1274 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms