RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MTFMTQ96DP5 389 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 C19orf60Q96EN9 201 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 TUBB1Q9H4B7 451 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 EHD1Q9H4M9 534 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 WDR55Q9H6Y2 383 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 MRPS30Q9NP92 439 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 CUEDC1Q9NWM3 386 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 HRASLS2Q9NWW9 162 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 LRIT1Q9P2V4 623 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 SNX6Q9UNH7 406 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 APOBEC2Q9Y235 224 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 PTGDR2Q9Y5Y4 395 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 RNF215Q9Y6U7 377 aa20.6■□□□□ 0.89
R3HCC1-208ENST00000522012 GOLGA8QA0A0J9YX86 632 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 GOLGA8OA6NCC3 632 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 GOLGA8NF8WBI6 632 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 MANBAO00462 879 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 TRIM38O00635 465 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 CCNDBP1O95273 360 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 KRT6AP02538 564 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 KRT6BP04259 564 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 RETP07949 1114 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 MYF5P13349 255 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 AMD1P17707 334 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 CMPK1P30085 196 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 KRT6CP48668 564 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 PPM1FP49593 454 aaPredicted RBP20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 HTR6P50406 440 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 SLBPQ14493 270 aaKnown RBP eCLIP20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 ARMC6Q6NXE6 501 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 ZCCHC8Q6NZY4 707 aaKnown RBP20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 OOSP2Q86WS3 158 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 MINDY1Q8N5J2 469 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 ANKS4BQ8N8V4 417 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 OR2L3Q8NG85 312 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 OR4C6Q8NH72 309 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 WDR34Q96EX3 536 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 EFCAB11Q9BUY7 163 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 ELOVL6Q9H5J4 265 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 MEAF6Q9HAF1 191 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 PELI2Q9HAT8 420 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 PRM3Q9NNZ6 103 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 ACTR10Q9NZ32 417 aa20.59■□□□□ 0.89
R3HCC1-208ENST00000522012 C2orf74A8MZ97 194 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 H7BY64 318 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 ULK1O75385 1050 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 UBXN7O94888 489 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 EPHA3P29320 983 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 CCR8P51685 355 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 ABATP80404 500 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 MEF2AQ02078 507 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 HIST2H2ACQ16777 129 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 PAGE2BQ5JRK9 111 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 NXNQ6DKJ4 435 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 HIST2H2AA3Q6FI13 130 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 ADCK2Q7Z695 626 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 CHCHD4Q8N4Q1 142 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 EID2Q8N6I1 236 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 PRAP1Q96NZ9 151 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 PFDN4Q9NQP4 134 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 FARSBQ9NSD9 589 aaKnown RBP20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 GEMIN8Q9NWZ8 242 aaKnown RBP20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 ZNF490Q9ULM2 529 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 ENTPD2Q9Y5L3 495 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 FANCMQ8IYD8 2048 aa20.58■□□□□ 0.89
R3HCC1-208ENST00000522012 OR5K3A6NET4 321 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 LILRA5A6NI73 299 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 SDHDO14521 159 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 UGT2B7P16662 529 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 NEK2P51955 445 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 INHBCP55103 352 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 IFT88Q13099 833 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 LAPTM5Q13571 262 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 ABRAXAS2Q15018 415 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 MED27Q6P2C8 311 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 KLHL35Q6PF15 583 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 ACAD11Q709F0 780 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 SUMF1Q8NBK3 374 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 ABHD11Q8NFV4 315 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 SELENOMQ8WWX9 145 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 RSC1A1Q92681 617 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 C3orf30Q96M34 536 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 OR2A14Q96R47 310 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 OR52B2Q96RD2 323 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 HBEGFQ99075 208 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 PADI4Q9UM07 663 aa20.58■□□□□ 0.88
R3HCC1-208ENST00000522012 ANKRD12Q6UB98 2062 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 ATP6AP2A0A1C7CYW4 349 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 SIGLEC6O43699 453 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 NUDT21O43809 227 aaKnown RBP20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 ATP6AP2O75787 350 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 PCNAP12004 261 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 GLB1P16278 677 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 ALDH4A1P30038 563 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 E2F2Q14209 437 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 NR0B2Q15466 257 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 KIAA1614Q5VZ46 1190 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 FRG2Q64ET8 278 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 TRIM73Q86UV7 250 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms