RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.5
SPIDR-209ENST00000519141 GPR45Q9Y5Y3 372 aa11.96□□□□□ -0.5
SPIDR-209ENST00000519141 ARHGEF17Q96PE2 2063 aaPredicted RBP11.96□□□□□ -0.5
SPIDR-209ENST00000519141 SERTM1A2A2V5 107 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 A6NCN8 305 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 RSL1D1O76021 490 aaKnown RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 EML2O95834 649 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 CDH1P12830 882 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 CTSEP14091 401 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 BCKDHBP21953 392 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 NEK2P51955 445 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 NME5P56597 212 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 GRIK2Q13002 908 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 LAPTM5Q13571 262 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 DDX39BQ13838 428 aaKnown RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 SLBPQ14493 270 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 HIST2H2ACQ16777 129 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 PDCD4Q53EL6 469 aaKnown RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 CATSPEREQ5SY80 951 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 C10orf62Q5T681 223 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 HIST2H2AA3Q6FI13 130 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 MED27Q6P2C8 311 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 NXPE4Q6UWF7 544 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 ZFAND4Q86XD8 727 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 ARHGAP24Q8N264 748 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 OR9I1Q8NGQ6 314 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 WDR20Q8TBZ3 569 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 PHOX2BQ99453 314 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 NRTNQ99748 197 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 SLC25A23Q9BV35 468 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 BRINP2Q9C0B6 783 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 TCEAL2Q9H3H9 227 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 XKR8Q9H6D3 395 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 C1orf109Q9NX04 203 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 DLGAP2Q9P1A6 1054 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 ICKQ9UPZ9 632 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 EIF3LQ9Y262 564 aaKnown RBP11.95□□□□□ -0.5
SPIDR-209ENST00000519141 GON4LQ3T8J9 2241 aa11.95□□□□□ -0.5
SPIDR-209ENST00000519141 A0A1W2PR77 199 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PIPSLA2A3N6 862 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 AIM2O14862 343 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 SEC22BO75396 215 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 SNRPB2P08579 225 aaKnown RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 KRT16P08779 473 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PCNAP12004 261 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 HSD3B1P14060 373 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CD1EP15812 388 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PRPH2P23942 346 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 HSD3B2P26439 372 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 MAOBP27338 520 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 SHMT2P34897 504 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 NUDT2P50583 147 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 STX5Q13190 355 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 RFTN2Q52LD8 501 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CACHD1Q5VU97 1274 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 IL23RQ5VWK5 629 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 LONP2Q86WA8 852 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 ABCA7Q8IZY2 2146 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 LINC01555Q8NAE3 123 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 OR7G3Q8NG95 312 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 UBE2E3Q969T4 207 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 RCN3Q96D15 328 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CMTM7Q96FZ5 175 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CADM1Q9BY67 442 aaKnown RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TM9SF3Q9HD45 589 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 GEMIN8Q9NWZ8 242 aaKnown RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 ASIC5Q9NY37 505 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 ZIM2Q9NZV7 527 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 ZNF624Q9P2J8 865 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 APOBEC3BQ9UH17 382 aaKnown RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 KLF15Q9UIH9 416 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TP53BP1Q12888 1972 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TDRD6O60522 2096 aaKnown RBP11.94□□□□□ -0.5
SPIDR-209ENST00000519141 GVINP1Q7Z2Y8 2422 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CCDC163A0A0D9SF12 145 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 A0A1W2PPV9 198 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 NPIPB8E9PQR5 432 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 NR5A2O00482 541 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 GSC2O15499 205 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 WNT1P04628 370 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 JUNDP17535 347 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PSMB5P28074 263 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 HOXA6P31267 233 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CPOXP36551 454 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 DMWDQ09019 674 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 MMEL1Q495T6 779 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 CYP20A1Q6UW02 462 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 LAYNQ6UX15 382 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TAF8Q7Z7C8 310 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 TMEFF1Q8IYR6 380 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 KRT78Q8N1N4 520 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 KYQ8NBH2 561 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 LCN9Q8WX39 176 aa11.94□□□□□ -0.5
SPIDR-209ENST00000519141 UTP4Q969X6 686 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms