RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TSPY2A6NKD2 308 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 CPLX1O14810 134 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 EPHB6O15197 1021 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 SNX3O60493 162 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 RPS6KA5O75582 802 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 APOHP02749 345 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 MYL6BP14649 208 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ZNF26P17031 533 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ACAT1P24752 427 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 OAS2P29728 719 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 KIF5BP33176 963 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ATP12AP54707 1039 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 NAGLUP54802 743 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 UBASH3AP57075 661 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 PPARDQ03181 441 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ILF2Q12905 390 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 UGCGQ16739 394 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 KRTAP27-1Q3LI81 207 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 LCN1P1Q5VSP4 162 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 KLHL10Q6JEL2 608 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 UGT3A1Q6NUS8 523 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ENPP7Q6UWV6 458 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ADAD2Q8NCV1 583 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 KBTBD8Q8NFY9 601 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 OR5AP2Q8NGF4 316 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 HCAR2Q8TDS4 363 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 MAP3K3Q99759 626 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 SLC2A11Q9BYW1 496 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 WDR13Q9H1Z4 485 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 XAB2Q9HCS7 855 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 FGF22Q9HCT0 170 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 PPANQ9NQ55 473 aaKnown RBP3.26□□□□□ -1.89
VPS13B-207ENST00000518569 SH3GLB2Q9NR46 395 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ATAD3AQ9NVI7 634 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 ANAPC5Q9UJX4 755 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 SNX7Q9UNH6 387 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 IKBKGQ9Y6K9 419 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 A0A087X002 238 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 C2CD4DB7Z1M9 353 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ZG16O60844 167 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 TBCAO75347 108 aaKnown RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 LUC7L3O95232 432 aaKnown RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SIX3O95343 332 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 PENKP01210 267 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SCG2P13521 617 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 IFNAR1P17181 557 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SP100P23497 879 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ALDH4A1P30038 563 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 CTNNA1P35221 906 aaKnown RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 BMXP51813 675 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 GCNT1Q02742 428 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 TMED1Q13445 227 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SQLEQ14534 574 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 CTU2Q2VPK5 515 aaKnown RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SLC25A53Q5H9E4 307 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 CEP85LQ5SZL2 805 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SPOUT1Q5T280 376 aaKnown RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ADAMTSL4-AS1Q5T5F5 129 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 IL27RAQ6UWB1 636 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 PPP1R21Q6ZMI0 780 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 IL17RELQ6ZVW7 336 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 TMEM178AQ8NBL3 297 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 Q8NFD4 153 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 OR10G8Q8NGN5 311 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 OR10Q1Q8NGQ4 319 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 KCNE4Q8WWG9 221 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SIPA1Q96FS4 1042 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 VMP1Q96GC9 406 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 C10orf90Q96M02 699 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 MGME1Q9BQP7 344 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 FUCA2Q9BTY2 467 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 P2RY12Q9H244 342 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ACTL8Q9H568 366 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ATP13A3Q9H7F0 1226 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 SCRT2Q9NQ03 307 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ARGLU1Q9NWB6 273 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 RNF186Q9NXI6 227 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 C19orf25Q9UFG5 118 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 ERRFI1Q9UJM3 462 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-207ENST00000518569 TNNQ9UQP3 1299 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 CHKBQ9Y259 395 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 KCNK7Q9Y2U2 307 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 NESP48681 1621 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 WDR81Q562E7 1941 aa3.25□□□□□ -1.89
VPS13B-207ENST00000518569 IL16Q14005 1332 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TRIM64CA6NLI5 447 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 H0YAE9 185 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 DDHD2O94830 711 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 GSRP00390 522 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 AZGP1P25311 298 aaKnown RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 GP5P40197 560 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 NPY4RP50391 375 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 MFAP3P55082 362 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 GSDMDP57764 484 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 IRX3P78415 501 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 HMGN5P82970 282 aaKnown RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 MZT1Q08AG7 82 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TRAP1Q12931 704 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms