RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RUFY1Q96T51 708 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ACAT2Q9BWD1 397 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ZDHHC18Q9NUE0 388 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 ADAMTS6Q9UKP5 1117 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 KCNMB2Q9Y691 235 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 BOD1L1Q8NFC6 3051 aa12.24□□□□□ -0.45
CLCN3-210ENST00000515420 IGKV1-8A0A0C4DH67 115 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CDC14CA4D256 554 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CTAGE15A4D2H0 777 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 TXNDC9O14530 226 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 C1QAP02745 245 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CTSBP07858 339 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CTAGE8P0CG41 777 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 PIM1P11309 404 aaPredicted RBP12.23□□□□□ -0.45
CLCN3-210ENST00000515420 GP5P40197 560 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 GPX6P59796 221 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CDKL1Q00532 357 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 PHKG1Q16816 387 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 DEFB109BQ30KR1 87 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 NKAIN1Q4KMZ8 207 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 ATP1A1-AS1Q5TC04 95 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 PRAMEF13Q5VWM6 474 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 AGTRAPQ6RW13 159 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 LCTLQ6UWM7 567 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CTAGE6Q86UF2 777 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CCDC25Q86WR0 208 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 RELL1Q8IUW5 271 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 APLFQ8IW19 511 aaPredicted RBP12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CTAGE4Q8IX94 777 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 PPFIBP2Q8ND30 876 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 ADAMTS17Q8TE56 1095 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 TSPAN17Q96FV3 270 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 IP6K3Q96PC2 410 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 RBBP8Q99708 897 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 SGPP1Q9BX95 441 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 SEMA4CQ9C0C4 833 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 TSPYL1Q9H0U9 437 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 STARD5Q9NSY2 213 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 CUTCQ9NTM9 273 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 TMEM184CQ9NVA4 438 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
CLCN3-210ENST00000515420 GPN3Q9UHW5 284 aaPredicted RBP12.23□□□□□ -0.45
CLCN3-210ENST00000515420 MAN2B2Q9Y2E5 1009 aa12.23□□□□□ -0.45
CLCN3-210ENST00000515420 TLN1Q9Y490 2541 aaKnown RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 CCDC88CQ9P219 2028 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 A0A0J9YVX5 310 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 KLF7O75840 302 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 ALBP02768 609 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 PRB1P04280 392 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 FURINP09958 794 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 FAM87AP0C7U9 286 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 PMS2P54278 862 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 VSX2P58304 361 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 TAS2R39P59534 338 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SLC7A5Q01650 507 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 GUCY2DQ02846 1103 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 KCNAB2Q13303 367 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 TSTA3Q13630 321 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 IL10RAQ13651 578 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 TRADDQ15628 312 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 MUM1Q2TAK8 710 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 PRTGQ2VWP7 1150 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 WASHC2DQ5SRD0 308 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 CAPN13Q6MZZ7 669 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 MRPL14Q6P1L8 145 aaKnown RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 PRMT9Q6P2P2 845 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SBSNQ6UWP8 590 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 TMEM207Q6UWW9 146 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 TTLL10Q6ZVT0 673 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 ADAMTSL2Q86TH1 951 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 RAB43Q86YS6 212 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 NACC2Q96BF6 587 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 FBXL8Q96CD0 374 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 THAP11Q96EK4 314 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 MVB12AQ96EY5 273 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 OR2A5Q96R48 311 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 GPR22Q99680 433 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SLC25A18Q9H1K4 315 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SLC26A1Q9H2B4 701 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 WDR54Q9H977 334 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 LRRC4CQ9HCJ2 640 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 GPAMQ9HCL2 828 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 ARL15Q9NXU5 204 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 IFT80Q9P2H3 777 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 MTRF1LQ9UGC7 380 aaKnown RBP12.22□□□□□ -0.45
CLCN3-210ENST00000515420 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 SPTA1P02549 2419 aa12.22□□□□□ -0.45
CLCN3-210ENST00000515420 NUP210LQ5VU65 1888 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms