RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 MUM1Q2TAK8 710 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 HKDC1Q2TB90 917 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 KLHL38Q2WGJ6 581 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 ANKRD20A4Q4UJ75 823 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 KIAA0930Q6ICG6 404 aaPredicted RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 PRMT9Q6P2P2 845 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 PAQR7Q86WK9 346 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CATSPER1Q8NEC5 780 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CABS1Q96KC9 395 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 PKP4Q99569 1192 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 SLC30A3Q99726 388 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 PLCD4Q9BRC7 762 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 EPS8L2Q9H6S3 715 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 MRPS30Q9NP92 439 aaKnown RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 LZTFL1Q9NQ48 299 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 C3orf18Q9UK00 162 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 RUVBL1Q9Y265 456 aaKnown RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 MAP2K7O14733 419 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CEP104O60308 925 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 COX6A1P12074 109 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 PKMP14618 531 aaKnown RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 OGNP20774 298 aaKnown RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CXCR5P32302 372 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 VPS41P49754 854 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CLCN7P51798 805 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 EMP3P54852 163 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 TSTA3Q13630 321 aaPredicted RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 TLR1Q15399 786 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 ANKRD22Q5VYY1 191 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 B3GNTL1Q67FW5 361 aaPredicted RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 NEPROQ6NW34 567 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 ISLR2Q6UXK2 745 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CAND1Q86VP6 1230 aaKnown RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CILP2Q8IUL8 1156 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 REXO1L1PQ8IX06 675 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 CSNK1A1LQ8N752 337 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 AMER2Q8N7J2 671 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 AMER3Q8N944 861 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 PRELID2Q8N945 189 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 PPFIBP2Q8ND30 876 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 COG1Q8WTW3 980 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 FAR1Q8WVX9 515 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 MAIP1Q8WWC4 291 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 SMPDL3AQ92484 453 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 PSMF1Q92530 271 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 VPS50Q96JG6 964 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 TRPC4Q9UBN4 977 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 TAC3Q9UHF0 121 aa11.62□□□□□ -0.55
SNHG4-208ENST00000514110 MDC1Q14676 2089 aaKnown RBP11.62□□□□□ -0.55
SNHG4-208ENST00000514110 IDSB3KWA1 339 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 E5RI56 91 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 E7ENX8 843 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PFDN6O15212 129 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 LRRTM2O43300 516 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 FOXS1O43638 330 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 VPS26AO75436 327 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 USP1O94782 785 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 SLC16A8O95907 504 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 CELA2AP08217 269 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PRR35P0CG20 571 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 EDN3P14138 238 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 SLC26A3P40879 764 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 MAGEA6P43360 314 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PNLIPRP1P54315 467 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 EMP2P54851 167 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 TAP2Q03519 686 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 EEF1A2Q05639 463 aaKnown RBP11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
SNHG4-208ENST00000514110 GPS1Q13098 491 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 DSG2Q14126 1118 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 ARHGAP19Q14CB8 494 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 NAA25Q14CX7 972 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 ICE2Q659A1 982 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 FAAH2Q6GMR7 532 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF425Q6IV72 752 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 CASC4Q6P4E1 433 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 NDUFAF7Q7L592 441 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 DENND6AQ8IWF6 608 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 ARHGEF39Q8N4T4 335 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 GIMAP7Q8NHV1 300 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF480Q8WV37 535 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 OR2A5Q96R48 311 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 LMF1Q96S06 567 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 YIPF2Q9BWQ6 316 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 PTGFRNQ9P2B2 879 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 OSGIN2Q9Y236 505 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 MED16Q9Y2X0 877 aa11.61□□□□□ -0.55
SNHG4-208ENST00000514110 CROCCQ5TZA2 2017 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 IGHV1-45A0A0A0MS14 117 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 A0A1W2PQ72 361 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 P2RX6O15547 441 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 PHF2O75151 1096 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms