RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SLC44A3Q8N4M1 653 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TMEM102Q8N9M5 508 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 PHC3Q8NDX5 983 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 OR52E6Q96RD3 313 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PKP2Q99959 881 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 GEMIN8Q9NWZ8 242 aaKnown RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 VAPAQ9P0L0 249 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PPT2Q9UMR5 302 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 NUP214P35658 2090 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3DA0A087WVF3 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3IA0A087WXS9 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3EA0A087X179 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3KA0A087X1G2 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TRBV5-3A0A0A0MS03 114 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3FA6NER0 549 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 PRR19A6NJB7 356 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3LB9A6J9 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 H3BQ06 376 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 DFNA5O60443 496 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 ETHE1O95571 254 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 SLC35G4P0C7Q5 338 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3HP0C7X1 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PCNAP12004 261 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 S100A3P33764 101 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 HSD17B2P37059 387 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PPP2CBP62714 309 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PPP2CAP67775 309 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PHC1P78364 1004 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 ACSM2AQ08AH3 577 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 LAPTM5Q13571 262 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 SELPLGQ14242 412 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 SLBPQ14493 270 aaKnown RBP eCLIP14.43□□□□□ -0.1
VCAN-211ENST00000513984 LRRC36Q1X8D7 754 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 DPY19L1Q2PZI1 675 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 SFT2D3Q587I9 215 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PRAMEF14Q5SWL7 426 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PRAMEF13Q5VWM6 474 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 ACSM2BQ68CK6 577 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3GQ6DHY5 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3CQ6IPX1 549 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 ADNP2Q6IQ32 1131 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 NXPE4Q6UWF7 544 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TICAM1Q8IUC6 712 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D3Q8IZP1 549 aaPredicted RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 LMNTD1Q8N9Z9 388 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 CATSPER1Q8NEC5 780 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 EGLN2Q96KS0 407 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 IL17FQ96PD4 163 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 MENTQ9BUN1 341 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 APOOQ9BUR5 198 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 ARMC1Q9NVT9 282 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 SPATA7Q9P0W8 599 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 NCKAP1Q9Y2A7 1128 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 TSC22D4Q9Y3Q8 395 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 PIPSLA2A3N6 862 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 ZNF839A8K0R7 811 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 FOXE1O00358 373 aaPredicted RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 KCNJ13O60928 360 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 ERN1O75460 977 aaKnown RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 ACP5P13686 325 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 PRPS1L1P21108 318 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 CLCNKAP51800 687 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 HNRNPFP52597 415 aaKnown RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 MTPNP58546 118 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 MTAPQ13126 283 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 CYP2A13Q16696 494 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 LRIF1Q5T3J3 769 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 CHST15Q7LFX5 561 aaPredicted RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 IFNEQ86WN2 208 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 SPPL2CQ8IUH8 684 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 MSRB3Q8IXL7 192 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 TBC1D21Q8IYX1 336 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 ADCY4Q8NFM4 1077 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 CHTF18Q8WVB6 975 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 SCARF2Q96GP6 870 aaPredicted RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 MRGPRX1Q96LB2 322 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 EFHD1Q9BUP0 239 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 EBPLQ9BY08 206 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 BTBD1Q9H0C5 482 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 KCNH6Q9H252 994 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 TRIT1Q9H3H1 467 aaKnown RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 RMND5AQ9H871 391 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 SERHLQ9NQF3 203 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 CCM2LQ9NUG4 571 aaPredicted RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 PLAGL1Q9UM63 463 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 TDRKHQ9Y2W6 561 aaKnown RBP14.42□□□□□ -0.1
VCAN-211ENST00000513984 PCDHB3Q9Y5E6 796 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 LRP4O75096 1905 aa14.42□□□□□ -0.1
VCAN-211ENST00000513984 TMEM265A0A087WTH1 108 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 A0A096LPI6 279 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 MYO1DO94832 1006 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 HOXC4P09017 264 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 GLULP15104 373 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 HOXB9P17482 250 aaPredicted RBP14.41□□□□□ -0.1
VCAN-211ENST00000513984 IGFBP4P22692 258 aa14.41□□□□□ -0.1
VCAN-211ENST00000513984 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms