RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 UMODP07911 640 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 ERGP11308 486 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 TCP1P17987 556 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 PAMP19021 973 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 ITGAXP20702 1163 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 GABRB3P28472 473 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 MPP1Q00013 466 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 DHX9Q08211 1270 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 ZNF169Q14929 603 aaPredicted RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 TLR1Q15399 786 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 LONRF1Q17RB8 773 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 KLHL38Q2WGJ6 581 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 SRRM1Q8IYB3 904 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 OR2A1Q8NGT9 310 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 SKA2Q8WVK7 121 aaPredicted RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 FAR1Q8WVX9 515 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 WDR83Q9BRX9 315 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 ENAMQ9NRM1 1142 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 C20orf96Q9NUD7 363 aaPredicted RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 NXT1Q9UKK6 140 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 FBXO5Q9UKT4 447 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 SLC39A10Q9ULF5 831 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 NTNG1Q9Y2I2 539 aa13.9□□□□□ -0.18
LETM1-207ENST00000512669 MDC1Q14676 2089 aaKnown RBP13.9□□□□□ -0.18
LETM1-207ENST00000512669 DOCK10Q96BY6 2186 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 GOLGA6L10A0A0M3HER8 536 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 TP73O15350 636 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 MED26O95402 600 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 ONECUT2O95948 504 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 MCM3P25205 808 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 GNG11P61952 73 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 CUL1Q13616 776 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 THOC5Q13769 683 aaKnown RBP13.89□□□□□ -0.19
LETM1-207ENST00000512669 PPP1R7Q15435 360 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 SF1Q15637 639 aaKnown RBP13.89□□□□□ -0.19
LETM1-207ENST00000512669 HSP90AA5PQ58FG0 334 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 YOD1Q5VVQ6 348 aaPredicted RBP13.89□□□□□ -0.19
LETM1-207ENST00000512669 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 OR2L3Q8NG85 312 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 DNAJB14Q8TBM8 379 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 SLC22A18Q96BI1 424 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 CAPZA3Q96KX2 299 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 ZNF285Q96NJ3 590 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 PKP4Q99569 1192 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 MIPEPQ99797 713 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 IARS2Q9NSE4 1012 aaKnown RBP13.89□□□□□ -0.19
LETM1-207ENST00000512669 IGSF5Q9NSI5 407 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.89□□□□□ -0.19
LETM1-207ENST00000512669 CDC23Q9UJX2 597 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 FBXL4Q9UKA2 621 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 OSGIN2Q9Y236 505 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 KLK4Q9Y5K2 254 aa13.89□□□□□ -0.19
LETM1-207ENST00000512669 A0A1B0GX78 115 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 TARM1B6A8C7 271 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 MYO1CO00159 1063 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 E2F3O00716 465 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 PFDN6O15212 129 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ERVK-10P10266 1014 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 CCNFP41002 786 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 CDC16Q13042 620 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 TTC23LQ6PF05 361 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 FAM180AQ6UWF9 173 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 KLHL7Q8IXQ5 586 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 DTWD1Q8N5C7 304 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
LETM1-207ENST00000512669 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 GRHL3Q8TE85 626 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ZUFSPQ96AP4 578 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 FOPNLQ96NB1 174 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 EBNA1BP2Q99848 306 aaKnown RBP13.88□□□□□ -0.19
LETM1-207ENST00000512669 RAB11FIP5Q9BXF6 653 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 LHPPQ9H008 270 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 SLC26A1Q9H2B4 701 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ZBTB20Q9HC78 741 aaPredicted RBP13.88□□□□□ -0.19
LETM1-207ENST00000512669 SPATA7Q9P0W8 599 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 KLHL42Q9P2K6 505 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ASIC3Q9UHC3 531 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 SNRNP200O75643 2136 aaKnown RBP13.88□□□□□ -0.19
LETM1-207ENST00000512669 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
LETM1-207ENST00000512669 ANKRD17O75179 2603 aaKnown RBP13.88□□□□□ -0.19
LETM1-207ENST00000512669 LOC105369274A0A096LPK9 316 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 IGKV1-8A0A0C4DH67 115 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 LOC102723532A0A0G2JNH3 316 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 GFYI3L273 518 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 STSP08842 583 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 PGAM1P18669 254 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 RIPPLY3P57055 190 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 CRYMQ14894 314 aa13.87□□□□□ -0.19
LETM1-207ENST00000512669 SLC9A5Q14940 896 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms