RNA–Protein interactions for RNA: ENST00000511643.5

RPL9-210, Transcript of ribosomal protein L9, human

TSL 2

Gene RPL9, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL9-210	ENST00000511643	ARHGEF16	Q5VV41	709 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PMF1	Q6P1K2	205 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	LRIG3	Q6UXM1	1119 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	LINGO2	Q7L985	606 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	NRARP	Q7Z6K4	114 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	RTN4RL2	Q86UN3	420 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CCDC25	Q86WR0	208 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	KLHDC8A	Q8IYD2	350 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	GALNT16	Q8N428	558 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	RASGEF1A	Q8N9B8	481 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	BBOF1	Q8ND07	529 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	MNS1	Q8NEH6	495 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	OR52N4	Q8NGI2	321 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	OR56B1	Q8NGI3	324 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	OR52K1	Q8NGK4	314 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	GPT2	Q8TD30	523 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	ADAMTS17	Q8TE56	1095 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	FCGR1B	Q92637	280 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	FBXO32	Q969P5	355 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	FAM46B	Q96A09	425 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	ESAM	Q96AP7	390 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	ORAI1	Q96D31	301 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PTCD3	Q96EY7	689 aa	Known RBP	4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	C16orf58	Q96GQ5	468 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	KAZALD1	Q96I82	304 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	TPD52L3	Q96J77	140 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PGBD1	Q96JS3	809 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PRMT6	Q96LA8	375 aa	Predicted RBP	4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	SPATA33	Q96N06	139 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	LMF1	Q96S06	567 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	MNT	Q99583	582 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	ZNF559	Q9BR84	538 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CAPS2	Q9BXY5	557 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CDT1	Q9H211	546 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	SNX25	Q9H3E2	840 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CUEDC2	Q9H467	287 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	MAGEF1	Q9HAY2	307 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CPNE5	Q9HCH3	593 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	KCNMB3	Q9NPA1	279 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	HOMER3	Q9NSC5	361 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	KLC4	Q9NSK0	619 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CDC14A	Q9UNH5	594 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	TRAF3IP3	Q9Y228	551 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	MFHAS1	Q9Y4C4	1052 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	PLXNA1	Q9UIW2	1896 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	RIF1	Q5UIP0	2472 aa	Known RBP	4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	FAM186A	A6NE01	2351 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	TRANK1	O15050	2925 aa		4.55	□□□□□ -1.68
RPL9-210	ENST00000511643	CFAP54	Q96N23	3096 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	NCAN	O14594	1321 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643		A0A0U1RQF3	1178 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	NCF1B	A6NI72	391 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	DUXA	A6NLW8	204 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	NCF1C	A8MVU1	366 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643		M0QX08	132 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	PRRG2	O14669	202 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	MAPK13	O15264	365 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	DCX	O43602	365 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	PLPP2	O43688	288 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	TLX2	O43763	284 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	SSX4	O60224	188 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	SURF6	O75683	361 aa	Known RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CH25H	O95992	272 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CXCL10	P02778	98 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	TPM1	P09493	284 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	NPS	P0C0P6	89 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	ANKRD34C	P0C6C1	535 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	NR2F6	P10588	404 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	APEH	P13798	732 aa	Known RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CD22	P20273	847 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CALB2	P22676	271 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	AKT2	P31751	481 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	HSD17B3	P37058	310 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CDKN1A	P38936	164 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	ARHGAP25	P42331	645 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	GPR12	P47775	334 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CXCR3	P49682	368 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CNN1	P51911	297 aa	Known RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	PRRX1	P54821	245 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	MFAP3	P55082	362 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	SNRPE	P62304	92 aa	Known RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	IRX4	P78413	519 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	TNFRSF17	Q02223	184 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	ARHGAP1	Q07960	439 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	KCNMB1	Q16558	191 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CARTPT	Q16568	116 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	MEP1A	Q16819	746 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	SLC36A3	Q495N2	470 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CFAP221	Q4G0U5	840 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	CCNYL2	Q5T2Q4	361 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	TMEM63B	Q5T3F8	832 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	C1QL3	Q5VWW1	255 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	MPZL3	Q6UWV2	235 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	DLEU7	Q6UYE1	221 aa		4.54	□□□□□ -1.68
RPL9-210	ENST00000511643	TRIM74	Q86UV6	250 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms